iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005442

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

GL348719

Gene Name

FZR2; ARALYDRAFT_914315

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_702057.1	scaffold_702057.1	scaffold_702057.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-24	85.6	291	321
E3 adaptor/Cullin RING/APC_C/CDC20	6.90e-143	476.1	157	458

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v++l++  +++ l+sG++D+ + vW+
   Q: 291  GHKSEVCGLKWsyDNRELASGGNDNRLFVWN 321
           8**********964499*************9 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl 92
           p+kvldap l+ddfylnL+dWs++nvlav+Lg++vylw+a++++v+kl+dl  +d+v+sv w  +gt+lavGt++g+v+i+D++++k++rt+
   Q: 157  PYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTM 248
           79****************************************************************************************** PP
   S: 93   tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavka 184
           +gh  rvgaL+W + vlssGsrd++il+rd+r++e ++s+l++h++evCGlkw+ d+++LasGGnDn + vw+++s++P+ k++eh+aavka
   Q: 249  EGHRLRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLTGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKA 340
           ******************************************************************************************** PP
   S: 185  iawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslals 276
           iawsP+ ++lLasGGGtaDrci+fwnt+t + l++idt sqvc+l+wsk+ +elvsthG+++n+i++wkyp++sk+a+l+gh++Rvl+la+s
   Q: 341  IAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVS 432
           ******************************************************************************************** PP
   S: 277  pdgeaivtaagDetlrfwklfdkkka 302
           pdg++ivt+agDetlrfw++f + k+
   Q: 433  PDGQTIVTGAGDETLRFWNVFPSPKS 458
           *********************87665 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEEEDPSASN VITNSNSSSH RNLSPAMNTP VVSLESRINR LINANQSQSP SRSIYSDRFI 60
PSRSGSNFAL FDLSPSPSKD GKEDGAGSYA TLLRAAMFGP ETPEKRDITG FSSSRNIFRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTCAACAA AAAAAAAACC ATGGAAGAAG AAGATCCTAG CGCAAGCAAT GTGATAACGA 60
ATTCGAATTC TTCATCTCAT AGAAATCTAT CGCCGGCGAT GAATACTCCG GTGGTTTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:0016049--P:cell growth
GO:0042023--P:DNA endoreduplication
GO:1904668--P:positive regulation of ubiquitin protein ligase activity
GO:0010091--P:trichome branching

KEGG

aly:ARALYDRAFT_914315

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000670	Aegilops tauschii	77.95	3.00e-154	537.00
IUUC-Aml-002003	Ailuropoda melanoleuca	54.18	4.00e-137	480.00
IUUC-Atr-002753	Amborella trichopoda	74.83	0.00e+00	629.00
IUUC-Apl-003212	Anas platyrhynchos	55.82	3.00e-140	491.00
IUUC-Ath-006938	Arabidopsis thaliana	96.89	0.00e+00	937.00
IUUC-Ago-007784	Ashbya gossypii	48.12	2.00e-97	348.00
IUUC-Acl-008269	Aspergillus clavatus	48.43	3.00e-131	461.00
IUUC-Afl-008432	Aspergillus flavus	50.10	2.00e-131	462.00
IUUC-Afu-008829	Aspergillus fumigatus	49.48	5.00e-131	460.00
IUUC-Ani-009471	Aspergillus nidulans	49.48	4.00e-131	461.00
IUUC-Ang-009711	Aspergillus niger	63.19	2.00e-129	455.00
IUUC-Aor-010118	Aspergillus oryzae	50.10	2.00e-131	462.00
IUUC-Ate-010534	Aspergillus terreus	48.87	2.00e-130	459.00
IUUC-Ame-011011	Astyanax mexicanus	57.40	1.00e-137	482.00
IUUC-Bgr-012013	Blumeria graminis	56.46	4.00e-124	437.00
IUUC-Bta-012586	Bos taurus	54.55	8.00e-140	489.00
IUUC-Bci-013807	Botrytis cinerea	49.10	5.00e-122	431.00
IUUC-Bdi-014981	Brachypodium distachyon	74.07	0.00e+00	634.00
IUUC-Bol-016301	Brassica oleracea	92.41	0.00e+00	875.00
IUUC-Bra-017453	Brassica rapa	91.98	0.00e+00	878.00
IUUC-Cel-018472	Caenorhabditis elegans	51.86	3.00e-122	431.00
IUUC-Cja-019929	Callithrix jacchus	54.87	6.00e-140	489.00
IUUC-Cfa-020977	Canis familiaris	53.39	7.00e-140	489.00
IUUC-Cpo-021537	Cavia porcellus	54.34	1.00e-139	489.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	48.10	1.00e-107	382.00
IUUC-Csa-023389	Chlorocebus sabaeus	55.95	7.00e-140	489.00
IUUC-Cin-025327	Ciona intestinalis	55.58	4.00e-130	457.00
IUUC-Csv-025921	Ciona savignyi	53.76	2.00e-130	458.00
IUUC-Cgl-026631	Colletotrichum gloeosporioides	60.47	5.00e-124	437.00
IUUC-Cne-026933	Cryptococcus neoformans	57.18	4.00e-124	438.00
IUUC-Cme-027143	Cyanidioschyzon merolae	62.62	5.00e-121	428.00
IUUC-Dre-027470	Danio rerio	57.08	4.00e-136	477.00
IUUC-Dno-029629	Dasypus novemcinctus	53.12	4.00e-120	424.00
IUUC-Dor-030187	Dipodomys ordii	55.35	3.00e-129	454.00
IUUC-Dse-031502	Dothistroma septosporum	45.49	9.00e-118	416.00
IUUC-Dme-031858	Drosophila melanogaster	53.47	2.00e-138	484.00
IUUC-Ete-032562	Echinops telfairi	71.92	1.00e-85	310.00
IUUC-Eca-034210	Equus caballus	55.95	1.00e-139	489.00
IUUC-Fca-035839	Felis catus	57.41	6.00e-136	476.00
IUUC-Fal-036895	Ficedula albicollis	55.82	3.00e-140	491.00
IUUC-Fox-037814	Fusarium oxysporum	61.75	2.00e-122	431.00
IUUC-Fso-038420	Fusarium solani	59.55	8.00e-124	436.00
IUUC-Gmo-039544	Gadus morhua	53.67	1.00e-137	482.00
IUUC-Ggr-039774	Gaeumannomyces graminis	48.28	3.00e-126	444.00
IUUC-Gga-041025	Gallus gallus	56.04	8.00e-141	493.00
IUUC-Gac-041596	Gasterosteus aculeatus	53.25	1.00e-135	475.00
IUUC-Gma-042657	Glycine max	77.68	0.00e+00	732.00
IUUC-Ggo-045599	Gorilla gorilla	53.39	3.00e-137	481.00
IUUC-Hsa-046695	Homo sapiens	54.04	6.00e-140	490.00
IUUC-Itr-048192	Ictidomys tridecemlineatus	55.73	7.00e-140	489.00
IUUC-Kpa-049239	Komagataella pastoris	44.71	7.00e-120	423.00
IUUC-Lch-049827	Latimeria chalumnae	54.32	4.00e-138	484.00
IUUC-Loc-052856	Lepisosteus oculatus	55.65	1.00e-137	482.00
IUUC-Mcc-055601	Macaca mulatta	55.95	7.00e-140	489.00
IUUC-Meu-056276	Macropus eugenii	54.85	6.00e-122	429.00
IUUC-Mor-057113	Magnaporthe oryzae	47.53	3.00e-125	441.00
IUUC-Mpo-057599	Magnaporthe poae	48.47	1.00e-126	446.00
IUUC-Mla-059048	Melampsora laricipopulina	46.07	1.00e-106	379.00
IUUC-Mga-060097	Meleagris gallopavo	52.93	7.00e-129	453.00
IUUC-Mvi-060465	Microbotryum violaceum	48.63	3.00e-125	441.00
IUUC-Mmr-061151	Microcebus murinus	49.26	3.00e-114	404.00
IUUC-Mdo-063062	Monodelphis domestica	55.82	1.00e-140	492.00
IUUC-Mmu-063731	Mus musculus	55.41	1.00e-139	488.00
IUUC-Mac-065208	Musa acuminata	79.17	0.00e+00	651.00
IUUC-Mpu-066173	Mustela putorius furo	54.13	1.00e-139	488.00
IUUC-Mlu-068030	Myotis lucifugus	55.08	3.00e-140	491.00
IUUC-Nfi-068536	Neosartorya fischeri	49.48	9.00e-131	459.00
IUUC-Ncr-068734	Neurospora crassa	47.64	3.00e-126	444.00
IUUC-Nle-070163	Nomascus leucogenys	55.82	1.00e-139	489.00
IUUC-Opr-070974	Ochotona princeps	66.09	2.00e-106	378.00
IUUC-Ont-071725	Oreochromis niloticus	55.51	1.00e-139	489.00
IUUC-Oan-073634	Ornithorhynchus anatinus	68.03	2.00e-116	410.00
IUUC-Obr-076123	Oryza brachyantha	77.25	2.00e-166	578.00
IUUC-Ogl-077294	Oryza glaberrima	69.35	3.00e-176	610.00
IUUC-Ogu-077996	Oryza glumaepatula	69.35	3.00e-176	610.00
IUUC-Oin-080172	Oryza indica	77.66	6.00e-166	576.00
IUUC-Olo-081068	Oryza longistaminata	77.41	4.00e-163	566.00
IUUC-Ome-081250	Oryza meridionalis	69.43	1.00e-176	612.00
IUUC-Oni-083048	Oryza nivara	69.35	3.00e-176	610.00
IUUC-Opu-083333	Oryza punctata	69.43	2.00e-179	621.00
IUUC-Oru-085001	Oryza rufipogon	69.35	4.00e-176	610.00
IUUC-Osa-086243	Oryza sativa	69.35	3.00e-176	610.00
IUUC-Ola-086983	Oryzias latipes	57.93	1.00e-138	486.00
IUUC-Oga-088911	Otolemur garnettii	54.55	7.00e-140	489.00
IUUC-Oar-089508	Ovis aries	54.55	8.00e-140	489.00
IUUC-Pan-092147	Papio anubis	54.04	6.00e-140	490.00
IUUC-Psi-093702	Pelodiscus sinensis	55.82	6.00e-140	489.00
IUUC-Pma-094581	Petromyzon marinus	53.17	2.00e-128	451.00
IUUC-Pno-095139	Phaeosphaeria nodorum	60.94	5.00e-117	414.00
IUUC-Ppa-095366	Physcomitrella patens	69.09	1.00e-179	622.00
IUUC-Pfo-096309	Poecilia formosa	53.67	3.00e-136	477.00
IUUC-Pop-098924	Populus trichocarpa	75.98	0.00e+00	719.00
IUUC-Pca-100565	Procavia capensis	53.39	1.00e-134	472.00
IUUC-Ppe-101924	Prunus persica	82.85	0.00e+00	744.00
IUUC-Pva-102602	Pteropus vampyrus	54.13	4.00e-134	470.00
IUUC-Pgr-103466	Puccinia graminis	48.28	9.00e-108	383.00
IUUC-Ptt-103888	Puccinia triticina	55.30	1.00e-97	350.00
IUUC-Pte-104097	Pyrenophora teres	49.11	6.00e-127	447.00
IUUC-Pyt-104445	Pyrenophora triticirepentis	44.77	6.00e-108	384.00
IUUC-Rno-105028	Rattus norvegicus	55.41	1.00e-139	489.00
IUUC-Sce-106240	Saccharomyces cerevisiae	48.80	2.00e-95	342.00
IUUC-Sha-106538	Sarcophilus harrisii	51.50	4.00e-119	421.00
IUUC-Sja-107785	Schizosaccharomyces japonicus	46.19	2.00e-113	401.00
IUUC-Spo-108369	Schizosaccharomyces pombe	44.42	8.00e-108	383.00
IUUC-Ssl-108391	Sclerotinia sclerotiorum	48.50	7.00e-123	433.00
IUUC-Smo-109041	Selaginella moellendorffii	65.05	0.00e+00	630.00
IUUC-Sit-110563	Setaria italica	72.81	6.00e-175	606.00
IUUC-Sly-111446	Solanum lycopersicum	77.95	0.00e+00	693.00
IUUC-Stu-112491	Solanum tuberosum	78.17	0.00e+00	694.00
IUUC-Sbi-114489	Sorghum bicolor	73.30	4.00e-178	617.00
IUUC-Sre-115222	Sporisorium reilianum	52.30	6.00e-118	417.00
IUUC-Ssc-116171	Sus scrofa	54.34	1.00e-139	489.00
IUUC-Tgu-116878	Taeniopygia guttata	49.12	3.00e-113	401.00
IUUC-Tru-118222	Takifugu rubripes	55.26	1.00e-136	478.00
IUUC-Tni-119863	Tetraodon nigroviridis	53.99	6.00e-137	480.00
IUUC-Tca-121599	Theobroma cacao	85.94	0.00e+00	766.00
IUUC-Tre-122249	Trichoderma reesei	48.42	1.00e-126	446.00
IUUC-Tvi-122675	Trichoderma virens	61.49	1.00e-125	442.00
IUUC-Tae-123489	Triticum aestivum	72.36	0.00e+00	635.00
IUUC-Tme-127151	Tuber melanosporum	52.97	4.00e-140	490.00
IUUC-Tbe-128056	Tupaia belangeri	58.96	3.00e-99	353.00
IUUC-Ttr-129055	Tursiops truncatus	53.69	3.00e-140	491.00
IUUC-Uma-129555	Ustilago maydis	52.54	4.00e-119	421.00
IUUC-Vda-130027	Verticillium dahliae	61.34	1.00e-125	442.00
IUUC-Vvi-131749	Vitis vinifera	80.57	0.00e+00	736.00
IUUC-Xtr-132808	Xenopus tropicalis	55.53	1.00e-141	495.00
IUUC-Xma-133183	Xiphophorus maculatus	53.67	3.00e-136	477.00
IUUC-Yli-134584	Yarrowia lipolytica	62.68	1.00e-126	446.00
IUUC-Zma-135717	Zea mays	72.35	3.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence