iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099546

Ensembl Protein ID

POPTR_0001s09920.1

UniProt Accession

B9GKC8; B9GKC8_POPTR

Genbank Protein ID

EEE82814.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_839722; POPTR_0001s09920g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s09920	POPTR_0001s09920.1	POPTR_0001s09920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-08	33.7	566	611

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf............sdtllvsGsdDgtikvWDlrtgvl 35
           gHt+ v cla             s + lvsGs D+t+++WDl+tg+l
   Q: 566  GHTGAVLCLAAhrmlgaargwsfS-HVLVSGSMDCTVRIWDLDTGNL 611
           799999999766778888776643.779****************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKCRSVACIW PDTPPSHKVT ASASLNHPPT LYTGGSDGSI LCWNLSSSDS NTEIKPVAML 60
CGHAAPIADL SICCPMVVTG EDTKTKCSSN GDGSSASDTY DALISACKFG VLCVWSRGSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTCTCATTC ATTTCCCTCC TCTCTCCCAC TCCAAAACTG ACTCACACAG TTCATGAAGT 60
GCCGATCCGT GGCGTGTATA TGGCCGGACA CACCTCCATC TCACAAAGTC ACCGCCTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s09920g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	39.57	3.00e-139	488.00
IUUC-Aml-001481	Ailuropoda melanoleuca	22.14	7.00e-12	66.60
IUUC-Atr-002981	Amborella trichopoda	49.02	0.00e+00	1295.00
IUUC-Apl-003943	Anas platyrhynchos	22.12	5.00e-13	69.70
IUUC-Aca-005145	Anolis carolinensis	21.28	2.00e-11	65.10
IUUC-Aly-005882	Arabidopsis lyrata	56.56	0.00e+00	1560.00
IUUC-Ath-006797	Arabidopsis thaliana	54.47	0.00e+00	1506.00
IUUC-Bta-012912	Bos taurus	22.84	1.00e-12	68.90
IUUC-Bol-016538	Brassica oleracea	55.06	0.00e+00	1437.00
IUUC-Bra-018098	Brassica rapa	51.07	0.00e+00	863.00
IUUC-Cja-019970	Callithrix jacchus	22.14	5.00e-12	67.00
IUUC-Cfa-020677	Canis familiaris	22.14	6.00e-12	66.60
IUUC-Cpo-021408	Cavia porcellus	22.14	1.00e-11	65.90
IUUC-Csa-023786	Chlorocebus sabaeus	22.14	6.00e-12	66.60
IUUC-Cho-024612	Choloepus hoffmanni	21.70	8.00e-12	66.20
IUUC-Cin-025255	Ciona intestinalis	27.67	4.00e-10	60.50
IUUC-Csv-026361	Ciona savignyi	27.04	9.00e-11	62.80
IUUC-Cne-026981	Cryptococcus neoformans	20.55	2.00e-15	78.60
IUUC-Dno-029072	Dasypus novemcinctus	22.14	5.00e-12	67.00
IUUC-Dme-031768	Drosophila melanogaster	28.22	3.00e-11	64.30
IUUC-Ete-032492	Echinops telfairi	21.91	3.00e-10	60.80
IUUC-Eca-033496	Equus caballus	22.14	6.00e-12	67.00
IUUC-Fca-035530	Felis catus	22.37	1.00e-11	65.50
IUUC-Fal-037238	Ficedula albicollis	23.42	6.00e-09	56.60
IUUC-Gmo-039528	Gadus morhua	21.91	3.00e-10	60.80
IUUC-Gga-041043	Gallus gallus	22.35	6.00e-13	69.70
IUUC-Gac-042524	Gasterosteus aculeatus	25.75	2.00e-09	58.20
IUUC-Gma-043201	Glycine max	57.29	0.00e+00	1625.00
IUUC-Ggo-045112	Gorilla gorilla	22.14	7.00e-12	66.60
IUUC-Hsa-046732	Homo sapiens	22.14	5.00e-12	67.00
IUUC-Itr-048340	Ictidomys tridecemlineatus	24.38	1.00e-09	57.40
IUUC-Lch-050643	Latimeria chalumnae	20.97	3.00e-09	57.80
IUUC-Loc-051774	Lepisosteus oculatus	22.86	9.00e-11	62.80
IUUC-Laf-054349	Loxodonta africana	22.14	3.00e-12	67.80
IUUC-Mcc-055800	Macaca mulatta	22.14	6.00e-12	67.00
IUUC-Mtr-058676	Medicago truncatula	57.21	0.00e+00	1622.00
IUUC-Mmr-061271	Microcebus murinus	22.14	6.00e-12	66.60
IUUC-Mdo-062622	Monodelphis domestica	21.68	4.00e-11	64.30
IUUC-Mmu-063262	Mus musculus	21.91	7.00e-12	66.60
IUUC-Mac-065659	Musa acuminata	51.89	0.00e+00	1209.00
IUUC-Mpu-066523	Mustela putorius furo	22.38	4.00e-11	64.30
IUUC-Mlu-067288	Myotis lucifugus	22.45	1.00e-10	62.40
IUUC-Nle-069610	Nomascus leucogenys	21.62	7.00e-12	66.60
IUUC-Ont-072199	Oreochromis niloticus	25.75	3.00e-09	58.20
IUUC-Oan-073095	Ornithorhynchus anatinus	21.46	1.00e-11	65.90
IUUC-Ocu-074257	Oryctolagus cuniculus	22.38	2.00e-12	68.20
IUUC-Obr-076894	Oryza brachyantha	46.76	0.00e+00	1118.00
IUUC-Ogu-078103	Oryza glumaepatula	47.57	0.00e+00	1132.00
IUUC-Olo-080818	Oryza longistaminata	45.07	0.00e+00	984.00
IUUC-Ome-081902	Oryza meridionalis	48.23	0.00e+00	1154.00
IUUC-Osa-085615	Oryza sativa	43.08	2.00e-149	522.00
IUUC-Oga-088290	Otolemur garnettii	22.38	1.00e-11	65.50
IUUC-Oar-089575	Ovis aries	22.61	2.00e-12	68.60
IUUC-Ptr-091041	Pan troglodytes	22.14	6.00e-12	66.60
IUUC-Pan-092048	Papio anubis	22.14	6.00e-12	67.00
IUUC-Psi-093637	Pelodiscus sinensis	22.45	1.00e-10	62.80
IUUC-Pma-094117	Petromyzon marinus	31.25	2.00e-08	53.90
IUUC-Pfo-096529	Poecilia formosa	22.19	8.00e-12	66.20
IUUC-Pab-098194	Pongo abelii	22.14	6.00e-12	66.60
IUUC-Ppe-101653	Prunus persica	66.42	0.00e+00	1963.00
IUUC-Pva-102803	Pteropus vampyrus	21.68	3.00e-11	64.30
IUUC-Rno-105904	Rattus norvegicus	21.68	2.00e-10	61.60
IUUC-Sha-106926	Sarcophilus harrisii	21.91	3.00e-11	63.90
IUUC-Sit-110049	Setaria italica	37.92	7.00e-146	511.00
IUUC-Sly-111516	Solanum lycopersicum	52.97	0.00e+00	1421.00
IUUC-Stu-111982	Solanum tuberosum	53.63	0.00e+00	1489.00
IUUC-Sar-113730	Sorex araneus	20.92	6.00e-11	63.50
IUUC-Sbi-114887	Sorghum bicolor	34.32	1.00e-126	447.00
IUUC-Ssc-116213	Sus scrofa	21.66	2.00e-12	67.40
IUUC-Tgu-117297	Taeniopygia guttata	23.26	3.00e-12	67.80
IUUC-Tsy-118970	Tarsius syrichta	21.62	4.00e-12	67.40
IUUC-Tni-119791	Tetraodon nigroviridis	25.75	1.00e-09	58.20
IUUC-Tca-121391	Theobroma cacao	65.21	0.00e+00	1686.00
IUUC-Tae-123628	Triticum aestivum	47.66	0.00e+00	1133.00
IUUC-Tur-125959	Triticum urartu	40.49	3.00e-150	525.00
IUUC-Ttr-128200	Tursiops truncatus	22.86	1.00e-10	62.40
IUUC-Vpa-130178	Vicugna pacos	22.25	6.00e-12	66.60
IUUC-Xtr-132699	Xenopus tropicalis	21.55	9.00e-10	58.90
IUUC-Xma-133180	Xiphophorus maculatus	21.13	1.00e-09	58.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence