iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129849

Ensembl Protein ID

EGY19403

UniProt Accession

G2XHV5; G2XHV5_VERDV

Genbank Protein ID

EGY19403.1

Protein Name

DNA repair protein RAD5

Genbank Nucleotide ID

DS572722

Gene Name

VDAG_09605

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_09605	EGY19403	EGY19403

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.19	2.00e-122	437.00	IUUC-Ath-007517
E3 activity/RING/RING	32.55	4.00e-138	487.00	IUUC-Sce-106396
E3 activity/RING/RING	39.42	1.00e-154	542.00	IUUC-Spo-108026

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MLTIVELPQA GTALQNVSRE RERELKWICQ EHSHLSMDHE PPTKRRRFFT DPEDDTGSHL 60
SSPVLPTPPT HQKTRFFQSP PNAGSSQIKS EDAPAFPSSP IPARGPLVEQ SIQDASNRSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGACCA TTGTCGAGCT GCCACAGGCG GGAACTGCAC TGCAAAATGT CAGCCGCGAG 60
AGAGAGCGAG AGCTAAAGTG GATTTGCCAG GAGCACAGTC ACGTGATCAC CCGACGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

vda:VDAG_09605

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	36.28	1.00e-118	418.00
IUUC-Atr-003139	Amborella trichopoda	36.29	2.00e-124	438.00
IUUC-Aly-005600	Arabidopsis lyrata	32.47	1.00e-128	452.00
IUUC-Ath-007517	Arabidopsis thaliana	31.70	1.00e-127	449.00
IUUC-Ago-007997	Ashbya gossypii	31.19	5.00e-123	434.00
IUUC-Acl-008022	Aspergillus clavatus	50.48	0.00e+00	1088.00
IUUC-Afl-008514	Aspergillus flavus	49.17	0.00e+00	1069.00
IUUC-Afu-009055	Aspergillus fumigatus	54.42	0.00e+00	1080.00
IUUC-Ani-009340	Aspergillus nidulans	50.33	0.00e+00	1016.00
IUUC-Ang-009785	Aspergillus niger	50.57	0.00e+00	1064.00
IUUC-Aor-010158	Aspergillus oryzae	49.17	0.00e+00	1069.00
IUUC-Ate-010536	Aspergillus terreus	49.79	0.00e+00	1001.00
IUUC-Ame-011743	Astyanax mexicanus	34.80	3.00e-78	285.00
IUUC-Bgr-012147	Blumeria graminis	57.61	0.00e+00	1129.00
IUUC-Bci-013741	Botrytis cinerea	60.56	0.00e+00	1290.00
IUUC-Bdi-014646	Brachypodium distachyon	35.23	4.00e-120	424.00
IUUC-Bol-015995	Brassica oleracea	33.55	4.00e-130	457.00
IUUC-Bra-017004	Brassica rapa	35.88	1.00e-125	442.00
IUUC-Cho-024891	Choloepus hoffmanni	35.84	2.00e-55	209.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	73.75	0.00e+00	1633.00
IUUC-Cne-026886	Cryptococcus neoformans	35.11	3.00e-163	567.00
IUUC-Cme-027110	Cyanidioschyzon merolae	31.58	1.00e-90	326.00
IUUC-Dse-031471	Dothistroma septosporum	53.45	0.00e+00	1116.00
IUUC-Eeu-034597	Erinaceus europaeus	33.62	5.00e-42	164.00
IUUC-Fox-038039	Fusarium oxysporum	64.60	0.00e+00	1398.00
IUUC-Fso-038179	Fusarium solani	64.55	0.00e+00	1358.00
IUUC-Ggr-039735	Gaeumannomyces graminis	63.61	0.00e+00	1333.00
IUUC-Gma-044315	Glycine max	30.87	2.00e-122	431.00
IUUC-Hvu-047747	Hordeum vulgare	36.06	6.00e-117	413.00
IUUC-Kpa-049087	Komagataella pastoris	33.00	3.00e-134	471.00
IUUC-Lpe-051123	Leersia perrieri	32.09	2.00e-123	435.00
IUUC-Lma-052956	Leptosphaeria maculans	55.19	0.00e+00	1134.00
IUUC-Mor-057210	Magnaporthe oryzae	61.90	0.00e+00	1313.00
IUUC-Mpo-057407	Magnaporthe poae	63.18	0.00e+00	1374.00
IUUC-Mtr-058565	Medicago truncatula	30.10	3.00e-117	414.00
IUUC-Mla-058867	Melampsora laricipopulina	37.56	4.00e-75	274.00
IUUC-Mvi-060322	Microbotryum violaceum	33.09	7.00e-113	400.00
IUUC-Mac-064548	Musa acuminata	32.75	2.00e-106	379.00
IUUC-Nfi-068354	Neosartorya fischeri	55.13	0.00e+00	1095.00
IUUC-Ncr-068844	Neurospora crassa	65.02	0.00e+00	1364.00
IUUC-Opr-070388	Ochotona princeps	41.26	7.00e-49	187.00
IUUC-Oba-075316	Oryza barthii	31.17	2.00e-120	425.00
IUUC-Obr-076403	Oryza brachyantha	35.15	2.00e-117	415.00
IUUC-Ogl-077508	Oryza glaberrima	31.79	8.00e-125	439.00
IUUC-Ogu-078083	Oryza glumaepatula	31.27	1.00e-124	439.00
IUUC-Oin-079893	Oryza indica	32.09	8.00e-128	449.00
IUUC-Olo-080615	Oryza longistaminata	31.92	1.00e-127	449.00
IUUC-Ome-081448	Oryza meridionalis	31.53	3.00e-116	411.00
IUUC-Oni-082773	Oryza nivara	31.27	9.00e-124	436.00
IUUC-Opu-083675	Oryza punctata	31.99	3.00e-126	444.00
IUUC-Oru-084543	Oryza rufipogon	31.50	2.00e-123	435.00
IUUC-Osa-085686	Oryza sativa	34.22	5.00e-114	403.00
IUUC-Pno-094916	Phaeosphaeria nodorum	55.61	0.00e+00	1108.00
IUUC-Ppa-095877	Physcomitrella patens	35.31	3.00e-122	431.00
IUUC-Pop-099320	Populus trichocarpa	34.48	8.00e-122	429.00
IUUC-Ppe-101820	Prunus persica	32.52	1.00e-121	429.00
IUUC-Pgr-103454	Puccinia graminis	32.96	3.00e-151	528.00
IUUC-Ptt-103829	Puccinia triticina	33.29	4.00e-98	351.00
IUUC-Pte-104242	Pyrenophora teres	52.91	0.00e+00	1129.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	57.88	0.00e+00	1117.00
IUUC-Sce-106396	Saccharomyces cerevisiae	36.10	6.00e-130	457.00
IUUC-Sha-107221	Sarcophilus harrisii	41.38	2.00e-48	186.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	39.09	0.00e+00	630.00
IUUC-Spo-108026	Schizosaccharomyces pombe	35.12	1.00e-175	608.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	60.31	0.00e+00	1290.00
IUUC-Sit-110076	Setaria italica	35.11	8.00e-118	416.00
IUUC-Sly-111908	Solanum lycopersicum	31.86	4.00e-128	450.00
IUUC-Stu-112600	Solanum tuberosum	33.55	7.00e-125	440.00
IUUC-Sbi-113927	Sorghum bicolor	35.33	2.00e-115	408.00
IUUC-Sre-115131	Sporisorium reilianum	39.11	6.00e-88	317.00
IUUC-Tca-121146	Theobroma cacao	32.15	4.00e-129	454.00
IUUC-Tre-121896	Trichoderma reesei	61.82	0.00e+00	1298.00
IUUC-Tvi-122597	Trichoderma virens	62.31	0.00e+00	1341.00
IUUC-Tae-123334	Triticum aestivum	35.19	1.00e-119	422.00
IUUC-Tur-125999	Triticum urartu	36.34	2.00e-117	414.00
IUUC-Tme-126953	Tuber melanosporum	49.76	0.00e+00	981.00
IUUC-Uma-129629	Ustilago maydis	36.15	2.00e-138	485.00
IUUC-Vvi-131508	Vitis vinifera	32.18	2.00e-124	438.00
IUUC-Yli-134588	Yarrowia lipolytica	33.30	1.00e-160	558.00
IUUC-Zma-135801	Zea mays	32.16	6.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence