iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099560

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_771537; POPTR_0011s09950g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s09950	POPTR_0011s09950.1	POPTR_0011s09950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.2	471	512

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++d+  k+    l+CgH +ha Cl+kw       + +  CP+C+
   Q: 471  CIICQDDYksKEKIAALDCGHEYHAVCLKKW------LRLKNVCPICK 512
           ********88555999***************......**********6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLCTNQMIDL EMDQQSQGYL HPEPCILLGG VTNFRPSDIP TMVAASGNTN NRDAHLVDHY 60
DGAMFYGMPQ YHGLHPHRQY HGPNLDLSVA TAPNFYVPYM TPSSGIPISH GPCDQLSSSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATCTTGGC TAAAGAAACA TGCTATGCAC CAATCAGATG ATTGATTTAG AAATGGATCA 60
ACAAAGCCAG GGATATCTAC ATCCTGAGCC TTGCATCCTT TTAGGGGGTG TGACAAACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0011s09950g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001082	Aegilops tauschii	27.83	1.00e-35	143.00
IUUC-Aly-005624	Arabidopsis lyrata	47.13	3.00e-106	378.00
IUUC-Ath-006931	Arabidopsis thaliana	46.45	1.00e-99	356.00
IUUC-Bdi-014154	Brachypodium distachyon	29.58	6.00e-45	174.00
IUUC-Bol-015103	Brassica oleracea	44.65	8.00e-83	300.00
IUUC-Ete-032580	Echinops telfairi	32.17	1.00e-13	71.20
IUUC-Lpe-051051	Leersia perrieri	30.97	2.00e-44	173.00
IUUC-Sly-111252	Solanum lycopersicum	45.14	6.00e-115	407.00
IUUC-Stu-112453	Solanum tuberosum	44.59	1.00e-113	403.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence