iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095309

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S110_33V6	PP1S110_33V6.1	PP1S110_33V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-29	101.4	162	197

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           H d ++ la+ + + l sGs+D+tikvW+l + +++ 
   Q: 162  HHDTISVLAL-GkGVLYSGSWDKTIKVWRLADLKCVE 197
           8888999999.4489***************9999975 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGFNVDVEAS SSLSGYQSSG TESLQGGVGS QPHRCLAVLS GHEGHVVSLA LVSDQTLYSG 60
SDRGDIRVSR WPPTQIMQDC DGSQFGRVEG SVKAMVVVGH KIFTAHQDQK IRMWKCSSKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTTA ATGTAGACGT AGAAGCAAGT TCAAGTTTGA GTGGCTACCA AAGCAGCGGT 60
ACCGAGTCGC TGCAAGGAGG AGTGGGAAGT CAGCCCCATC GTTGTCTTGC AGTGCTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	36.51	1.00e-40	159.00
IUUC-Aly-005620	Arabidopsis lyrata	44.93	5.00e-78	283.00
IUUC-Ath-006729	Arabidopsis thaliana	44.69	1.00e-77	282.00
IUUC-Bdi-014024	Brachypodium distachyon	43.96	5.00e-69	254.00
IUUC-Bra-017666	Brassica rapa	44.20	4.00e-73	268.00
IUUC-Hvu-047445	Hordeum vulgare	43.80	1.00e-68	253.00
IUUC-Lpe-051623	Leersia perrieri	42.13	1.00e-66	246.00
IUUC-Mtr-057641	Medicago truncatula	47.06	2.00e-77	282.00
IUUC-Mac-065257	Musa acuminata	43.00	4.00e-61	227.00
IUUC-Oba-075783	Oryza barthii	42.89	7.00e-72	263.00
IUUC-Obr-076198	Oryza brachyantha	42.64	1.00e-71	263.00
IUUC-Ogl-077280	Oryza glaberrima	42.89	7.00e-72	263.00
IUUC-Ogu-078924	Oryza glumaepatula	43.29	6.00e-72	264.00
IUUC-Oin-079931	Oryza indica	44.81	3.00e-71	261.00
IUUC-Olo-080744	Oryza longistaminata	45.58	7.00e-57	213.00
IUUC-Oni-082948	Oryza nivara	44.81	3.00e-71	261.00
IUUC-Opu-083881	Oryza punctata	45.28	5.00e-71	261.00
IUUC-Oru-084999	Oryza rufipogon	44.81	3.00e-71	261.00
IUUC-Osa-085749	Oryza sativa	44.81	3.00e-71	261.00
IUUC-Pop-099212	Populus trichocarpa	47.73	8.00e-78	283.00
IUUC-Smo-108708	Selaginella moellendorffii	42.86	1.00e-47	182.00
IUUC-Sit-109859	Setaria italica	42.08	5.00e-65	241.00
IUUC-Stu-112836	Solanum tuberosum	44.02	1.00e-75	276.00
IUUC-Sbi-114260	Sorghum bicolor	43.65	6.00e-69	254.00
IUUC-Tca-121089	Theobroma cacao	46.67	3.00e-80	291.00
IUUC-Tur-126500	Triticum urartu	39.84	7.00e-62	230.00
IUUC-Vvi-131118	Vitis vinifera	47.99	1.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence