iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113780

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G006500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g000760	Sb03g000760.1	Sb03g000760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-21	76.8	221	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           +H d v+cl +     +ll +Gs+D+t+k W+l +g ++ 
   Q: 221  QHRDTVSCLVLhavA-GLLYTGSHDHTVKAWRLADGSCVD 259
           59******9888532.9*******************9986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDFGRRKSFS FFEEDRKSSS RPPGAHTPVH QYYARAGGGR RSPAREVAEP ARLSMSSAVP 60
GGHGVEAMPL SPMQQMHAGA GAGSCSPWVQ SPLHGRLRFP PSPAAIYHCL AALHRLEGDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTTCG GCCGGCGCAA GAGCTTCAGC TTCTTCGAGG AGGACCGCAA GTCGTCGTCG 60
CGGCCGCCGG GCGCGCACAC GCCCGTGCAC CAGTACTACG CGCGCGCCGG CGGTGGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0042807--C:central vacuole
GO:0005887--C:integral component of plasma membrane
GO:0009705--C:plant-type vacuole membrane
GO:0015250--F:water channel activity
GO:0034220--P:ion transmembrane transport

KEGG

sbi:SORBI_03g000770

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	72.20	9.00e-136	476.00
IUUC-Atr-002893	Amborella trichopoda	47.43	5.00e-62	230.00
IUUC-Bdi-014017	Brachypodium distachyon	79.48	2.00e-168	584.00
IUUC-Gma-044257	Glycine max	49.57	1.00e-91	329.00
IUUC-Hvu-047512	Hordeum vulgare	70.30	7.00e-70	255.00
IUUC-Lpe-051634	Leersia perrieri	75.27	1.00e-166	578.00
IUUC-Mtr-058235	Medicago truncatula	44.50	1.00e-85	310.00
IUUC-Mac-064451	Musa acuminata	53.82	2.00e-96	345.00
IUUC-Ogl-077347	Oryza glaberrima	73.81	5.00e-178	616.00
IUUC-Ogu-079043	Oryza glumaepatula	73.63	5.00e-178	616.00
IUUC-Oin-079372	Oryza indica	73.85	6.00e-176	609.00
IUUC-Ome-081348	Oryza meridionalis	77.80	4.00e-173	600.00
IUUC-Oni-082993	Oryza nivara	73.81	5.00e-178	616.00
IUUC-Opu-083517	Oryza punctata	75.25	4.00e-132	463.00
IUUC-Oru-085049	Oryza rufipogon	73.81	5.00e-178	616.00
IUUC-Osa-085538	Oryza sativa	73.81	9.00e-178	615.00
IUUC-Pop-100024	Populus trichocarpa	49.44	2.00e-96	345.00
IUUC-Ppe-101634	Prunus persica	46.07	2.00e-89	321.00
IUUC-Sit-110460	Setaria italica	81.08	0.00e+00	717.00
IUUC-Stu-112837	Solanum tuberosum	38.22	4.00e-93	334.00
IUUC-Tca-121243	Theobroma cacao	44.05	1.00e-100	359.00
IUUC-Tae-123954	Triticum aestivum	71.08	1.00e-177	615.00
IUUC-Vvi-131707	Vitis vinifera	41.74	9.00e-93	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence