iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131707

Ensembl Protein ID

VIT_04s0008g03540.t01

UniProt Accession

D7SUB4; D7SUB4_VITVI

Genbank Protein ID

CBI20863.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

VIT_04s0008g03540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g03540	VIT_04s0008g03540.t01	VIT_04s0008g03540.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-31	108.1	183	220
UBD/Beta-Prp	8.90e-57	193.1	181	417

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H+d ++c+a+   ++ll +Gs+D t+k W++++  ++ 
   Q: 183  HKDCISCMAYyhAEGLLYTGSWDRTVKAWRVSDKQCVD 220
           9********986559****************9988875 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dlstgkcvh 88
           ++hk+ i+c+++   + ll tgs+d+t+k w+v++++++ s+  he+ v+a+  ++++  l t+s+D+ +kvw      +  t +++ 
   Q: 181  QKHKDCISCMAYYHAEGLLYTGSWDRTVKAWRVSDKQCVDSFVAHEDNVNAIVVNQEDGCLFTCSSDGSVKVWrrlyveSSHTLTMTL 268
           789**********************************************************************999876666888888 PP
   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           +++    ++l+ls+s ++ +l sGs+d  i+ w+ e+ +         +l+gh+ +v c+v  +  +l++sGs D+t+r+W+ + g++
   Q: 269  KFQPSPVNALALSLSLNTCFLYSGSSDGFINFWEKEKMSG--RfnhggFLQGHRFAVLCLVAVE--KLVFSGSEDTTIRVWRREEGSC 352
           8888888889999999*****************6555443..35589*****************..********************** PP
   S: 172  lrtl...tgghtdsvysls..fdsng......kelvsgsldgtvklwdlq......tgecvrtlngh 221
            ++      gh ++v++l+  +  ++      + + s+sld+t k+w ++      ++ c+++ n  
   Q: 353  YHEClavLDGHRGPVRCLAacL--EMekvvmgFLVYSASLDQTFKVWRIRvlpddqKKMCLDESNRS 417
           ***9999555*********763..33336677******************99999888888876655 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEFYGKRSLS SYMDEERKAI NQSPNRAPLR THQQISEQDL HLSPTRSRMT LMPPPSPESP 60
WTLSPLHTPS PSLLYHCIAS LHRHEGNIYS IAVSRGLVFT GSESSRVRVW RQPDCIERGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCCATGGAA TTCTATGGCA AGAGAAGTCT TTCTAGCTAC ATGGATGAAG AGAGGAAGGC 60
AATTAATCAA TCTCCAAATC GTGCCCCTCT CAGAACCCAT CAACAAATTT CAGAACAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	45.33	4.00e-85	307.00
IUUC-Atr-002893	Amborella trichopoda	55.59	9.00e-100	356.00
IUUC-Bdi-014017	Brachypodium distachyon	44.24	5.00e-98	350.00
IUUC-Gma-044257	Glycine max	74.84	0.00e+00	662.00
IUUC-Lpe-051634	Leersia perrieri	45.23	1.00e-94	339.00
IUUC-Mtr-058235	Medicago truncatula	68.05	0.00e+00	632.00
IUUC-Mac-064451	Musa acuminata	61.34	2.00e-139	487.00
IUUC-Ogl-077347	Oryza glaberrima	44.67	4.00e-101	361.00
IUUC-Ogu-079043	Oryza glumaepatula	44.67	4.00e-101	361.00
IUUC-Oin-079372	Oryza indica	44.39	2.00e-100	358.00
IUUC-Ome-081348	Oryza meridionalis	49.86	1.00e-100	359.00
IUUC-Oni-082993	Oryza nivara	44.67	4.00e-101	361.00
IUUC-Opu-083517	Oryza punctata	49.35	5.00e-80	290.00
IUUC-Oru-085049	Oryza rufipogon	44.67	4.00e-101	361.00
IUUC-Osa-085538	Oryza sativa	44.67	5.00e-101	360.00
IUUC-Pop-100024	Populus trichocarpa	71.43	0.00e+00	627.00
IUUC-Ppe-101382	Prunus persica	72.04	2.00e-154	537.00
IUUC-Sit-110460	Setaria italica	41.60	1.00e-103	369.00
IUUC-Stu-112837	Solanum tuberosum	70.89	0.00e+00	657.00
IUUC-Sbi-113780	Sorghum bicolor	48.51	5.00e-94	337.00
IUUC-Tca-121243	Theobroma cacao	74.56	0.00e+00	731.00
IUUC-Tae-123251	Triticum aestivum	46.01	4.00e-102	364.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence