iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135521

UUCD1 version

UUC-ZeM-00846

Ensembl Protein ID

Zm00001d021868_T001

UniProt Accession

A0A1D6IHE0; A0A1D6IHE0_MAIZE

Genbank Protein ID

ONM58918.1

Protein Name

COMPASS-like H3K4 histone methylase component WDR5B

Genbank Nucleotide ID

CM007650

Gene Name

ZEAMMB73_Zm00001d021868

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d021868	Zm00001d021868_T001	Zm00001d021868_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-46	156.3	164	202
UBD/Beta-Prp	3.00e-65	222.3	23	326

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++vt+++f  d  ++vsGs+Dg++k+WD ++g +lk+
   Q: 164  HSEPVTSVHFiRDgSIVVSGSHDGSCKIWDAKSGACLKT 202
           9**********887999*****************99985 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls..............tg 84
           h+  i+cv fsp ++llat+s dgt+ + + ++  +++ l gh+++v+++++s ++ +l ++s+Drti++wd++              + 
   Q: 23   HSRAISCVRFSPCGRLLATASLDGTVALLSPSSLAVIAVLRGHSDGVSDLSWSTESFYLCSASDDRTIRIWDIRpvlaggaqaaavsgAD 112
           7889****************************************************9********************************* PP
   S: 85   kcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
            cv++lkgh++ v s +f+p++ + ++sG+ d t+r+wd  +g c +   + h++ v++v++  dg+++vsGs D+ +++Wd k+g +l+
   Q: 113  RCVRVLKGHTNFVFSANFNPQTsSQIASGGFDCTVRIWDATSGRCTR-AIEAHSEPVTSVHFIRDGSIVVSGSHDGSCKIWDAKSGACLK 201
           ********************655************************.99**************************************** PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktl 260
           t   +++++v    f++ngk+++ + ld+++kl ++ tg+ ++ + gh +  ++++      n++++vsgs+D+ ++iWdl+ +++l++l
   Q: 202  TVIDEKKPAVSFSMFSPNGKFILVAMLDNSLKLCNFATGKFLKVYSGHVNRQYCIQSAfsvTNGKYIVSGSEDNCVYIWDLQGRNVLQKL 291
           **887888888888***************************************998766799**************************** PP
   S: 261  qlhnssvisvavlsfgdnvlvlgse..dskvniwkl 294
           ++h ++visv++ ++++n++++g+   d +v++w +
   Q: 292  EGHTDTVISVSC-HPTENKIASGGLhnDRTVRLWVQ 326
           ************.**********9999*******65 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSQQPAPAPP YRPYRQVREA TPHSRAISCV RFSPCGRLLA TASLDGTVAL LSPSSLAVIA 60
VLRGHSDGVS DLSWSTESFY LCSASDDRTI RIWDIRPVLA GGAQAAAVSG ADRCVRVLKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATAACCAT CATCAAGGTG CCGGAATACA GTTAGATCGA TCTAACGGAT AGAGCTGACT 60
GCTTGCATAT GCGCTAGTAC AAATAGAGCG CCGCAGTGAA TCCGGCCCAA TTCACTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0489--Methyltransferase
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000502	Aegilops tauschii	80.86	2.00e-142	497.00
IUUC-Atr-002924	Amborella trichopoda	64.19	2.00e-107	381.00
IUUC-Aly-005655	Arabidopsis lyrata	63.73	4.00e-116	410.00
IUUC-Ath-007545	Arabidopsis thaliana	61.98	6.00e-116	409.00
IUUC-Bdi-014642	Brachypodium distachyon	84.94	4.00e-159	553.00
IUUC-Bol-015533	Brassica oleracea	63.07	7.00e-113	399.00
IUUC-Bra-017641	Brassica rapa	62.75	1.00e-112	399.00
IUUC-Gma-042658	Glycine max	60.38	2.00e-113	401.00
IUUC-Mtr-058429	Medicago truncatula	60.77	7.00e-106	376.00
IUUC-Oba-075292	Oryza barthii	83.65	1.00e-151	528.00
IUUC-Obr-076723	Oryza brachyantha	84.69	2.00e-150	524.00
IUUC-Ogl-077247	Oryza glaberrima	85.90	3.00e-157	547.00
IUUC-Ogu-078143	Oryza glumaepatula	84.86	2.00e-155	541.00
IUUC-Oin-080203	Oryza indica	84.86	2.00e-155	541.00
IUUC-Ome-082003	Oryza meridionalis	84.39	4.00e-152	530.00
IUUC-Oni-082216	Oryza nivara	84.86	2.00e-155	541.00
IUUC-Oru-084935	Oryza rufipogon	84.91	7.00e-156	542.00
IUUC-Osa-085444	Oryza sativa	85.17	5.00e-156	543.00
IUUC-Pop-099988	Populus trichocarpa	63.14	4.00e-117	413.00
IUUC-Ppe-101291	Prunus persica	64.38	5.00e-117	413.00
IUUC-Sit-110579	Setaria italica	92.21	3.00e-164	570.00
IUUC-Sbi-113874	Sorghum bicolor	95.21	2.00e-172	597.00
IUUC-Tca-121324	Theobroma cacao	63.58	2.00e-115	408.00
IUUC-Tae-124942	Triticum aestivum	85.99	1.00e-157	548.00
IUUC-Tur-126219	Triticum urartu	82.61	9.00e-89	319.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence