iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007603

UUCD1 version

UUC-ArT-00559

Ensembl Protein ID

AT1G02860.1

UniProt Accession

Q9SRX9; B3H5D0; Q8L8T3; BAH1_ARATH

Genbank Protein ID

AAY57582.1; AAF02879.1; AEE27485.1; AEE27486.1; BAF01258.1; AAM67132.1; ACI31316.1

Protein Name

E3 ubiquitin-protein ligase BAH1; Protein BENZOIC ACID HYPERSENSITIVE 1; Protein NITROGEN LIMITATION ADAPTATION; RING-type E3 ubiquitin transferase BAH1

Genbank Nucleotide ID

DQ059096; AC009525; CP002684; CP002684; AK229396; AY088823; BT044616

Gene Name

BAH1; NLA; At1g02860; F22D16.14

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G02860	AT1G02860.3	AT1G02860.3
AT1G02860	AT1G02860.1	AT1G02860.1
AT1G02860	AT1G02860.2	AT1G02860.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	18753285

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.80e-05	26.0	231	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl..qkw....pglknssskefrCPlCr 46
           C+iCl+  +d p++l CgH+++  C          ++  + +  + +CPlCr
   Q: 231  CSICLDTVFD-PISLTCGHIYCYMCAcsA-AsvnvVDGLKTAEATEKCPLCR 280
           **********.**************7641.24455777788999999****8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Mediates E2-dependent protein ubiquitination. Plays a role in salicylic acid-mediated negative feedback regulation of salicylic acid (SA) accumulation. May be involved in the overall regulation of SA, benzoic acid and phenylpropanoid biosynthesis. Controls the adaptability to nitrogen limitation by channeling the phenylpropanoid metabolic flux to the induced anthocyanin synthesis.

Protein Sequence
(Fasta)

MKFCKKYEEY MQGQKEKKNL PGVGFKKLKK ILKRCRRNHV PSRISFTDAI NHNCSRECPV 60
CDGTFFPELL KEMEDVVGWF NEHAQKLLEL HLASGFTKCL TWLRGNSRKK DHHGLIQEGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCCCAA AACAAACGTT TTGACTTTTT TTTTGTTTTC TCATATTCTT TTATTTCACA 60
ACTTGTTATT TCCGCCGACT TCACCAGTCA CCACCACCTT CATTTATTCA TAAATACGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR004331--SPX_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51382--SPX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016607--C:nuclear speck
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009626--P:plant-type hypersensitive response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010337--P:regulation of salicylic acid metabolic process
GO:0080021--P:response to benzoic acid
GO:0010167--P:response to nitrate
GO:0009751--P:response to salicylic acid
GO:0009697--P:salicylic acid biosynthetic process
GO:0009627--P:systemic acquired resistance

KEGG

ath:AT1G02860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000402	Aegilops tauschii	57.26	9.00e-101	359.00
IUUC-Atr-002937	Amborella trichopoda	57.89	1.00e-84	305.00
IUUC-Aly-006134	Arabidopsis lyrata	97.01	0.00e+00	659.00
IUUC-Bdi-014332	Brachypodium distachyon	58.38	3.00e-100	357.00
IUUC-Bol-016417	Brassica oleracea	84.46	4.00e-158	550.00
IUUC-Bra-017786	Brassica rapa	84.27	7.00e-158	548.00
IUUC-Cho-024585	Choloepus hoffmanni	42.59	3.00e-07	48.90
IUUC-Cgl-026426	Colletotrichum gloeosporioides	25.67	4.00e-09	55.50
IUUC-Dor-030631	Dipodomys ordii	39.62	4.00e-07	48.50
IUUC-Gmo-038481	Gadus morhua	40.00	4.00e-07	48.50
IUUC-Gma-043751	Glycine max	68.06	5.00e-130	456.00
IUUC-Hvu-047712	Hordeum vulgare	59.41	9.00e-105	372.00
IUUC-Itr-047901	Ictidomys tridecemlineatus	31.25	4.00e-08	51.20
IUUC-Lpe-050909	Leersia perrieri	59.24	1.00e-100	358.00
IUUC-Mtr-057944	Medicago truncatula	66.87	7.00e-125	439.00
IUUC-Mac-064602	Musa acuminata	65.07	1.00e-118	419.00
IUUC-Nle-069150	Nomascus leucogenys	36.11	6.00e-07	48.10
IUUC-Opr-071144	Ochotona princeps	43.40	2.00e-07	49.70
IUUC-Oan-073272	Ornithorhynchus anatinus	38.46	5.00e-08	52.40
IUUC-Oba-075836	Oryza barthii	56.12	3.00e-92	330.00
IUUC-Obr-076486	Oryza brachyantha	60.60	8.00e-104	369.00
IUUC-Ogl-077626	Oryza glaberrima	61.19	6.00e-106	376.00
IUUC-Ogu-078145	Oryza glumaepatula	55.86	3.00e-91	327.00
IUUC-Oin-079757	Oryza indica	61.19	6.00e-106	376.00
IUUC-Olo-080266	Oryza longistaminata	55.22	3.00e-90	323.00
IUUC-Ome-082016	Oryza meridionalis	55.52	2.00e-89	321.00
IUUC-Oni-082394	Oryza nivara	55.56	9.00e-91	325.00
IUUC-Opu-084051	Oryza punctata	48.66	2.00e-81	294.00
IUUC-Oru-085105	Oryza rufipogon	55.82	5.00e-92	330.00
IUUC-Osa-085877	Oryza sativa	60.90	8.00e-106	375.00
IUUC-Pma-094166	Petromyzon marinus	43.64	6.00e-08	48.50
IUUC-Ppa-095647	Physcomitrella patens	41.21	2.00e-68	252.00
IUUC-Pop-098883	Populus trichocarpa	68.36	1.00e-127	448.00
IUUC-Ppe-102102	Prunus persica	66.77	1.00e-124	438.00
IUUC-Pgr-103338	Puccinia graminis	36.62	2.00e-05	42.00
IUUC-Ptt-103920	Puccinia triticina	36.62	2.00e-05	42.00
IUUC-Smo-108884	Selaginella moellendorffii	49.85	8.00e-93	332.00
IUUC-Sit-110105	Setaria italica	60.12	6.00e-102	363.00
IUUC-Sly-111455	Solanum lycopersicum	64.04	3.00e-116	410.00
IUUC-Stu-112682	Solanum tuberosum	62.87	4.00e-119	420.00
IUUC-Sbi-114377	Sorghum bicolor	60.12	3.00e-108	384.00
IUUC-Tca-121488	Theobroma cacao	70.45	8.00e-131	459.00
IUUC-Tae-124905	Triticum aestivum	58.43	2.00e-102	365.00
IUUC-Tur-126565	Triticum urartu	49.42	8.00e-75	272.00
IUUC-Vvi-131175	Vitis vinifera	69.25	3.00e-125	440.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence