iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079855

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000127

Gene Name

OsI_08535

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA008842	BGIOSGA008842-TA	BGIOSGA008842-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	4.40e-32	111.0	7	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ flCpIs+elM+dPv++++G+tydr+sIe+wl  +g+ tcP t+qpl++ dl+Pn+tl+r+i++w+++ s
   Q: 7    PPQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRtTCPATMQPLSNFDLTPNHTLKRVISSWLDRGS 79
           799********************************777776***************************99866 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MAAMDEPPQL FLCPISMELM EDPVTVSTGV TYDRRSIEEW LFVYGRTTCP ATMQPLSNFD 60
LTPNHTLKRV ISSWLDRGSS SSSSSSPSTS TLSSPIHELA TPLSRALEQE RLLAALAELE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCCA TGGACGAGCC TCCTCAGCTA TTCCTCTGCC CGATCTCCAT GGAGCTCATG 60
GAGGATCCGG TGACGGTGTC CACCGGCGTG ACGTACGACC GCCGGAGCAT CGAGGAGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000809	Aegilops tauschii	80.57	2.00e-87	315.00
IUUC-Bdi-014372	Brachypodium distachyon	69.66	5.00e-128	450.00
IUUC-Hvu-047566	Hordeum vulgare	84.47	3.00e-157	546.00
IUUC-Lpe-050855	Leersia perrieri	86.64	2.00e-158	551.00
IUUC-Oba-075501	Oryza barthii	97.18	0.00e+00	649.00
IUUC-Obr-076599	Oryza brachyantha	91.29	0.00e+00	649.00
IUUC-Ogl-077111	Oryza glaberrima	100.00	0.00e+00	686.00
IUUC-Ogu-078584	Oryza glumaepatula	97.63	0.00e+00	676.00
IUUC-Olo-080660	Oryza longistaminata	75.72	6.00e-64	236.00
IUUC-Ome-081267	Oryza meridionalis	99.53	0.00e+00	684.00
IUUC-Oni-082485	Oryza nivara	100.00	0.00e+00	686.00
IUUC-Opu-083368	Oryza punctata	91.08	6.00e-168	582.00
IUUC-Oru-084495	Oryza rufipogon	100.00	0.00e+00	686.00
IUUC-Osa-085478	Oryza sativa	100.00	0.00e+00	686.00
IUUC-Sit-109870	Setaria italica	80.23	9.00e-165	572.00
IUUC-Sbi-113805	Sorghum bicolor	79.30	2.00e-162	564.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence