iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080660

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539661.1_FG007	KN539661.1_FGT007	KN539661.1_FGP007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-32	111.8	4	76

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ flCpIs+elM+dPv++++G+tydr+sIe+wl  +g+ tcP t+qpl++ dl+Pn+tl+r+i++w+++ s
   Q: 4    PPQLFLCPISMELMEDPVTVSTGVTYDRRSIEEWLFVYGRtTCPATMQPLSNFDLTPNHTLKRVISSWLDRGS 76
           799********************************777776***************************99866 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDEPPQLFLC PISMELMEDP VTVSTGVTYD RRSIEEWLFV YGRTTCPATM QPLSNFDLTP 60
NHTLKRVISS WLDRGSSSSS PSTSTLSSPI HELATPLSRA LEQERLLAAL AELEETPFKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAGC CTCCTCAGCT CTTCCTCTGC CCGATCTCCA TGGAGCTCAT GGAGGATCCG 60
GTGACGGTGT CCACCGGCGT GACGTACGAC CGCCGGAGCA TCGAGGAGTG GCTCTTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000809	Aegilops tauschii	75.30	5.00e-55	207.00
IUUC-Atr-002928	Amborella trichopoda	41.82	5.00e-29	120.00
IUUC-Bdi-014372	Brachypodium distachyon	67.07	8.00e-47	180.00
IUUC-Gma-043777	Glycine max	69.12	2.00e-25	109.00
IUUC-Hvu-047566	Hordeum vulgare	75.46	7.00e-51	193.00
IUUC-Lpe-050855	Leersia perrieri	84.93	4.00e-52	197.00
IUUC-Mtr-057873	Medicago truncatula	60.81	6.00e-24	103.00
IUUC-Mac-065147	Musa acuminata	30.10	2.00e-29	121.00
IUUC-Oba-075501	Oryza barthii	75.72	7.00e-64	236.00
IUUC-Obr-076599	Oryza brachyantha	68.06	2.00e-61	228.00
IUUC-Ogl-077111	Oryza glaberrima	75.72	5.00e-64	237.00
IUUC-Ogu-078584	Oryza glumaepatula	75.72	6.00e-64	237.00
IUUC-Oin-079855	Oryza indica	75.72	5.00e-64	237.00
IUUC-Ome-081267	Oryza meridionalis	75.72	6.00e-64	237.00
IUUC-Oni-082485	Oryza nivara	75.72	5.00e-64	237.00
IUUC-Opu-083368	Oryza punctata	94.48	3.00e-56	211.00
IUUC-Oru-084495	Oryza rufipogon	75.72	5.00e-64	237.00
IUUC-Osa-085478	Oryza sativa	75.72	5.00e-64	237.00
IUUC-Sit-109870	Setaria italica	74.25	7.00e-54	203.00
IUUC-Sly-111695	Solanum lycopersicum	64.18	1.00e-24	106.00
IUUC-Stu-112639	Solanum tuberosum	68.12	4.00e-25	108.00
IUUC-Sbi-113805	Sorghum bicolor	74.25	4.00e-53	201.00
IUUC-Tae-124754	Triticum aestivum	62.76	2.00e-40	159.00
IUUC-Tur-126771	Triticum urartu	62.44	3.00e-56	211.00
IUUC-Vvi-131248	Vitis vinifera	45.65	1.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence