iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121394

Ensembl Protein ID

EOX91071

UniProt Accession

A0A061DM68; A0A061DM68_THECC

Genbank Protein ID

EOX91068.1; EOX91069.1; EOX91070.1; EOX91071.1; EOX91072.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001879; CM001879; CM001879; CM001879; CM001879

Gene Name

TCM_000364

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000364	EOX91071	EOX91071

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-27	96.7	273	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pee+ CpIs  lM dPvv++sG+t++r  I+kw+++g++tcP+t++ l++ +l+Pn ++++li++wc + +
   Q: 273  PPEEYQCPISSRLMYDPVVIASGQTFERIWIQKWFDDGNNTCPKTKKILSNLSLTPNAVMKDLISKWCMKYG 344
           59******************************************************************8765 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGTDAAEVVE TPTIPSFFKV HHMMCTELGK FVDRIVRIFP EIEAARPRCD SGIKALCSLN 60
NAIVKAKSLL QYCSESSKLY LAITTDAIVS RCQRSKNLFE QSLCQIQSMV PVMLAVEISQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTGGTGTT GTTATACAGC TTCAAAAATA CACATACAGA AAAAAAGGGG GAACTTTCTT 60
CATCATTGTT CTGGTTTCCG CATCACAAGG TGAGTTTTTC TCTTCCCCTT CCCTCTCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	37.12	7.00e-117	414.00
IUUC-Aly-005788	Arabidopsis lyrata	40.06	5.00e-130	457.00
IUUC-Ath-006905	Arabidopsis thaliana	39.97	9.00e-128	450.00
IUUC-Bdi-014593	Brachypodium distachyon	36.26	3.00e-110	391.00
IUUC-Bol-016241	Brassica oleracea	39.69	7.00e-128	450.00
IUUC-Bra-018043	Brassica rapa	39.97	4.00e-128	451.00
IUUC-Gma-044030	Glycine max	51.26	0.00e+00	672.00
IUUC-Hvu-047756	Hordeum vulgare	37.37	2.00e-115	409.00
IUUC-Lpe-050784	Leersia perrieri	36.59	4.00e-109	388.00
IUUC-Mtr-058085	Medicago truncatula	48.61	0.00e+00	672.00
IUUC-Mac-064841	Musa acuminata	41.03	3.00e-123	435.00
IUUC-Oba-075842	Oryza barthii	36.65	1.00e-107	383.00
IUUC-Obr-076217	Oryza brachyantha	36.26	4.00e-111	394.00
IUUC-Ogl-077921	Oryza glaberrima	36.65	1.00e-107	383.00
IUUC-Ogu-078199	Oryza glumaepatula	37.02	2.00e-107	382.00
IUUC-Oin-079116	Oryza indica	37.01	3.00e-108	385.00
IUUC-Olo-080352	Oryza longistaminata	36.02	6.00e-103	367.00
IUUC-Ome-081110	Oryza meridionalis	36.72	9.00e-108	384.00
IUUC-Oni-082415	Oryza nivara	37.22	6.00e-108	384.00
IUUC-Opu-083658	Oryza punctata	36.44	1.00e-106	380.00
IUUC-Oru-084974	Oryza rufipogon	37.01	8.00e-109	387.00
IUUC-Osa-086052	Oryza sativa	36.86	7.00e-108	384.00
IUUC-Pop-098901	Populus trichocarpa	59.54	0.00e+00	806.00
IUUC-Ppe-101895	Prunus persica	54.22	3.00e-147	514.00
IUUC-Sit-110432	Setaria italica	35.87	5.00e-100	357.00
IUUC-Sly-111406	Solanum lycopersicum	46.43	7.00e-151	526.00
IUUC-Stu-112174	Solanum tuberosum	46.80	2.00e-161	562.00
IUUC-Sbi-113885	Sorghum bicolor	36.16	8.00e-93	333.00
IUUC-Tae-123361	Triticum aestivum	38.03	7.00e-118	417.00
IUUC-Tur-126678	Triticum urartu	37.78	8.00e-107	381.00
IUUC-Vvi-130887	Vitis vinifera	54.90	0.00e+00	704.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence