iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109306

Ensembl Protein ID

EFJ12502

UniProt Accession

D8SSK2; D8SSK2_SELML

Genbank Protein ID

EFJ12502.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377638

Gene Name

SELMODRAFT_157928

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_157928	EFJ12502	EFJ12502

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-22	77.5	31	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gHt  v ++a+ s   l +G+ D+++kvW+ ++g+++
   Q: 31   GHTKAVKGIALsS--SLYTGGQDKSVKVWNSDDGKCT 65
           8**********53..7******************997 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MKGDCNRGSQ CNFLHSYSTT TEMEMMTQLT GHTKAVKGIA LSSSLYTGGQ DKSVKVWNSD 60
DGKCTTTVPM GSEVESLLIA SGWLFVGLPN EVRAWNMQTN AQQSLDGPKG QVYALAVCED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGCAAGC GCCACATTTC CAGCCATCGC ATCCCCCAGG TGTGTAGATA CTGGCAAGAA 60
GGCCGATGCA ACAAGGGCGA TAGCTGCCAG TGGCTCCACT CGTCGGGCCC TGGAACATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

smo:SELMODRAFT_157928

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	34.94	2.00e-51	195.00
IUUC-Aly-005699	Arabidopsis lyrata	54.43	6.00e-100	357.00
IUUC-Ath-007001	Arabidopsis thaliana	54.11	3.00e-99	354.00
IUUC-Bol-016382	Brassica oleracea	54.26	3.00e-99	354.00
IUUC-Mtr-058068	Medicago truncatula	54.11	3.00e-94	338.00
IUUC-Mac-065071	Musa acuminata	54.11	1.00e-97	349.00
IUUC-Ogl-077192	Oryza glaberrima	43.67	1.00e-57	215.00
IUUC-Pop-099994	Populus trichocarpa	55.41	1.00e-98	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence