iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015964

Ensembl Protein ID

Bo5g012020.1

UniProt Accession

A0A0D3C935; A0A0D3C935_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g012020	Bo5g012020.1	Bo5g012020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-26	92.5	289	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           e++lCpIsle+M+dPvv+++G+tydrssI kw+ sg+ tcP+t++ lt+++lv+n ++ ++iq++c +n+
   Q: 289  EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPKTGKILTSTELVDNVSVSHVIQKHCRANG 358
           789****************************************************************997 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MIHTKTGSNR RILTFPAVQP CKSISVTTLL DSLIQLAGDI LTFKQKHFST NKRSFQKTIR 60
QIQNLAIVLE EIRIRVGSRR RYFPGVSSLS EIHVIFQKLK FLLEDCTRDG GRLCMLMSSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCACA CTAAAACCGG GTCAAATCGC CGGATCCTGA CCTTTCCGGC TGTGCAACCA 60
TGCAAATCAA TCTCCGTAAC CACGCTACTC GACTCACTGA TTCAACTCGC CGGCGACATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010029--P:regulation of seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	35.86	5.00e-75	275.00
IUUC-Aly-006201	Arabidopsis lyrata	77.71	0.00e+00	1063.00
IUUC-Ath-006754	Arabidopsis thaliana	78.57	0.00e+00	1031.00
IUUC-Bdi-014095	Brachypodium distachyon	36.54	3.00e-89	323.00
IUUC-Bra-017789	Brassica rapa	93.83	0.00e+00	1232.00
IUUC-Hvu-047204	Hordeum vulgare	36.98	3.00e-104	372.00
IUUC-Lpe-051010	Leersia perrieri	36.38	2.00e-70	260.00
IUUC-Loc-051960	Lepisosteus oculatus	25.58	5.00e-10	58.90
IUUC-Mtr-058256	Medicago truncatula	45.52	5.00e-142	498.00
IUUC-Mac-064527	Musa acuminata	38.98	4.00e-55	209.00
IUUC-Obr-076695	Oryza brachyantha	37.09	7.00e-59	221.00
IUUC-Ogl-077133	Oryza glaberrima	39.87	2.00e-81	296.00
IUUC-Ogu-078633	Oryza glumaepatula	39.04	4.00e-81	295.00
IUUC-Oin-079248	Oryza indica	39.04	9.00e-81	294.00
IUUC-Ome-081678	Oryza meridionalis	37.99	1.00e-80	294.00
IUUC-Oni-082545	Oryza nivara	37.99	3.00e-81	296.00
IUUC-Opu-083981	Oryza punctata	36.23	6.00e-92	331.00
IUUC-Oru-084317	Oryza rufipogon	38.18	4.00e-81	295.00
IUUC-Osa-085294	Oryza sativa	37.80	1.00e-80	293.00
IUUC-Pop-099290	Populus trichocarpa	41.58	1.00e-140	493.00
IUUC-Sit-110113	Setaria italica	36.28	3.00e-100	359.00
IUUC-Sly-111130	Solanum lycopersicum	42.20	4.00e-148	518.00
IUUC-Sbi-114188	Sorghum bicolor	36.21	9.00e-92	330.00
IUUC-Tca-120990	Theobroma cacao	49.78	7.00e-177	613.00
IUUC-Tae-123313	Triticum aestivum	36.63	1.00e-98	353.00
IUUC-Tur-126514	Triticum urartu	34.56	9.00e-82	297.00
IUUC-Vvi-131344	Vitis vinifera	44.52	3.00e-149	521.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence