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Tag Content
iUUCD ID IUUC-Aly-005545
Ensembl Protein ID fgenesh2_kg.4__2388__AT2G42350.1
UniProt Accession D7LI49; D7LI49_ARALL
Genbank Protein ID EFH56240.1
Protein Name Zinc finger family protein
Genbank Nucleotide ID GL348716
Gene Name ARALYDRAFT_483328
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.4__2388__AT2G42350.1 fgenesh2_kg.4__2388__AT2G42350.1 fgenesh2_kg.4__2388__AT2G42350.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 7.10e-08 33.5 101 143
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    Ca+Cl+ + kd + lp C+Hvfh +C+ w ++ +CP+Cr
   Q: 101 CAVCLSLLeeKDNARMLPnCKHVFHVTCVDTW------LTTQSTCPVCR 143
    ******9977555999999*************......**********8 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MSSDNKTNDD SDRSFWQSST SYDASSKIML VTTVSFSVII LIVFVYYLYA KFVLRRRRST 60
FQDLSFSVVS HPPKRGLDTL VIASLPTFVV GVKNEVAGTE CAVCLSLLEE KDNARMLPNC 120
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Protein Fasta Sequence



>IUUC-Aly-005545|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGATCCCTTC AATCTATTAT AGTAACTTGT TATTAACTTG TTCTACCAAA ACAAAAACGC 60
TTCATCATGA GCTCTGACAA CAAAACAAAT GATGATTCCG ACCGTTCGTT TTGGCAAAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005545|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG aly:ARALYDRAFT_483328
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000564 Aegilops tauschii 48.72 5.00e-19 86.70
IUUC-Atr-003161 Amborella trichopoda 40.00 4.00e-23 100.00
IUUC-Ath-007263 Arabidopsis thaliana 89.45 3.00e-103 366.00
IUUC-Bdi-014991 Brachypodium distachyon 39.47 2.00e-22 98.60
IUUC-Bol-015416 Brassica oleracea 69.09 2.00e-80 290.00
IUUC-Bra-017497 Brassica rapa 68.78 4.00e-81 293.00
IUUC-Cho-024278 Choloepus hoffmanni 52.08 4.00e-11 63.20
IUUC-Gma-042714 Glycine max 46.00 8.00e-32 129.00
IUUC-Mac-065470 Musa acuminata 41.50 2.00e-23 102.00
Created Date 25-Jun-2017

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