iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018349

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BX284603

Gene Name

CELE_T07E3.4; T07E3.4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00020315	T07E3.4a	T07E3.4a

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	11864566

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.032	14.6	80	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 99   daglldrlpeeilveilkll...dkeellraarvcrrwqelas 138
           + + +dr+p+eil+eil+++   +++++l+a+r +rr++ +++
   Q: 80   KPTYFDRIPNEILFEILENCkstEPSTVLAARRLSRRFNACMD 122
           44689**************97766666************8876 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MELQRKRSFN TSTVSHDFRK EFKGSFLETK YRKVKKDGKK NGLKSIAEWL FTKTSAKKNG 60
APVTSSAEKV CANMVTVKEK PTYFDRIPNE ILFEILENCK STEPSTVLAA RRLSRRFNAC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAATTCTT GCGCCGTTAA CACAATGGAG TTGCAAAGAA AGCGCAGTTT TAACACATCT 60
ACAGTATCCC ATGACTTTAG AAAAGAGTTC AAGGGCTCCT TGTAGGTTAA GCTTCAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

Pfam

PF00646--F-box

KEGG

cel:CELE_T07E3.4

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000322	Aegilops tauschii	30.23	5.00e-03	34.30
IUUC-Atr-002434	Amborella trichopoda	30.43	5.00e-03	33.10
IUUC-Apl-003414	Anas platyrhynchos	26.36	1.10e-02	33.10
IUUC-Bdi-014925	Brachypodium distachyon	25.23	2.70e-02	32.00
IUUC-Cne-026865	Cryptococcus neoformans	33.85	2.90e-02	33.10
IUUC-Dse-031572	Dothistroma septosporum	35.19	3.00e-03	33.50
IUUC-Fso-038105	Fusarium solani	29.09	5.80e-02	31.20
IUUC-Hvu-047593	Hordeum vulgare	26.28	7.40e-02	30.80
IUUC-Ont-071442	Oreochromis niloticus	30.00	3.40e-02	31.60
IUUC-Oni-082600	Oryza nivara	28.40	2.90e-02	31.20
IUUC-Pno-094787	Phaeosphaeria nodorum	32.00	9.00e-03	32.00
IUUC-Pfo-097286	Poecilia formosa	32.14	2.20e-02	32.70
IUUC-Pyt-104506	Pyrenophora triticirepentis	31.71	1.10e-02	33.50
IUUC-Smo-109142	Selaginella moellendorffii	36.11	5.30e-02	30.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence