iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113883

UUCD1 version

UUC-SoB-00096

Ensembl Protein ID

Sb01g050097.1

UniProt Accession

A0A1B6QR42; A0A1B6QR42_SORBI

Genbank Protein ID

KXG40391.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G538500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g050097	Sb01g050097.1	Sb01g050097.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.40e-06	27.2	63	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 19   vvlpsGitydrssIekwlasggk...tcPvtrqplteedlv 56
           +++p+G++y rs++e wl++gg+   +cP + ++++ e ++
   Q: 63   CCIPCGHVYGRSCLESWLSRGGTtsaKCPQCAKRFALEHII 103
           689********************888899998888776665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

ELEGAGMGMG DVVQQSGHGR GEAGNGGARV SAAAAAEGGD VGGRPTCCVC MEPWTDSGAH 60
RICCIPCGHV YGRSCLESWL SRGGTTSAKC PQCAKRFALE HIINLYAPGN LWDRHIQ 117

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Nucleotide Sequence
(Fasta)

GAGTTGGAGG GCGCGGGCAT GGGGATGGGG GACGTGGTCC AGCAGAGCGG CCACGGAAGA 60
GGCGAGGCGG GGAACGGCGG AGCTAGGGTT TCCGCGGCGG CAGCGGCTGA AGGCGGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014892--RPA_C
IPR011991--WHTH_DNA-bd_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF08784--RPA_C
PF13639--zf-RING_2

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000799	Aegilops tauschii	61.67	1.00e-15	77.00
IUUC-Obr-076245	Oryza brachyantha	63.64	5.00e-26	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence