iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126642

Ensembl Protein ID

TRIUR3_24101-P1

UniProt Accession

M8AM42; M8AM42_TRIUA

Genbank Protein ID

EMS66145.1

Protein Name

Protein TRANSPARENT TESTA GLABRA 1

Genbank Nucleotide ID

KD035408

Gene Name

TRIUR3_24101

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_24101	TRIUR3_24101-T1	TRIUR3_24101-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-12	47.1	18	49

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H   v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 18   HDKAVHDIAWGEaGVFASVSADGSVRVFDLRD 49
           8889******55799**************997 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MGFHAIEAES DSLELIAHDK AVHDIAWGEA GVFASVSADG SVRVFDLRDK EHSTIVYESP 60
RPDTPLLRLA WNRYDLRYMA ALLMDSNAVV VLDIRAPGVP VAELHRHGGC VNAVAWAPQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTTTC ACGCTATTGA AGCGGAATCA GATTCTTTGG AGGTAATCAA TTTTTGCATT 60
GGACATGATC ATTGGTGGGA TGCTGCAACA ACAATATATG CGGAAATCTT GAACTTGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	100.00	9.00e-52	193.00
IUUC-Bdi-014944	Brachypodium distachyon	94.29	4.00e-94	336.00
IUUC-Oba-075455	Oryza barthii	85.14	2.00e-87	315.00
IUUC-Obr-076064	Oryza brachyantha	85.71	2.00e-88	318.00
IUUC-Ogl-077224	Oryza glaberrima	85.14	2.00e-87	315.00
IUUC-Ogu-078639	Oryza glumaepatula	85.14	2.00e-87	315.00
IUUC-Oin-080194	Oryza indica	85.14	2.00e-87	314.00
IUUC-Olo-080234	Oryza longistaminata	85.14	2.00e-87	314.00
IUUC-Oni-082021	Oryza nivara	85.14	2.00e-87	314.00
IUUC-Opu-083903	Oryza punctata	85.14	2.00e-87	314.00
IUUC-Oru-084738	Oryza rufipogon	85.14	2.00e-87	315.00
IUUC-Osa-085445	Oryza sativa	85.14	2.00e-87	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence