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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007579
UUCD1 version UUC-ArT-00174
Ensembl Protein ID AT3G09770.1
UniProt Accession Q9S752; LOFG2_ARATH
Genbank Protein ID AAF23258.1; AAF23312.1; AEE74810.1; AAL66972.1; AAM65384.1
Protein Name Probable E3 ubiquitin-protein ligase LOG2; Probable RING-type E3 ubiquitin transferase LOG2; Protein LOSS OF GDU2; RING finger protein 215
Genbank Nucleotide ID AC015985; AC016661; CP002686; AY074275; AY087831
Gene Name LOG2; RF215; RIG2; At3g09770; F11F8.36; F8A24.18
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G09770 AT3G09770.2 AT3G09770.2
AT3G09770 AT3G09770.1 AT3G09770.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexHINTMentha
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 15644464; 23696092; 24036454
Classification
Family E-value Score Start End
E3 activity/RING/RING 0.00018 22.9 319 358
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgH.vfhadClqkwpglknssskefrCPlCr 46
           C iCl++++d + vlpC H +++  C + +        ++ rCP+Cr
   Q: 319  CVICLSEPRD-TTVLPCRHmCMCSGCAKVL------RFQTNRCPICR 358
           ********99.888*****889****8666......8999******8 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (in vitro). Required for GLUTAMINE DUMPER 1(GDU1)-induced amino acid secretion and for amino acid homeostasis. Ubiquitinates GDU1 (in vitro).
 Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (in vitro). Required for GLUTAMINE DUMPER 1(GDU1)-induced amino acid secretion and for amino acid homeostasis. Ubiquitinates GDU1 (in vitro).
Protein Sequence
(Fasta)
MGNISSSGGE GRRRRRRNHT AAPPPPPPPP SSSLPPPPLP TEIQANPIVF AAVTPYPNPN 60
PNPVYQYPAS YYHHPPPGAM PLPPYDHHLQ HHPPHPYHNH SWAPVAMARY PYAGHMMAQP 120
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Protein Fasta Sequence


>IUUC-Ath-007579|E3,RING|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
TTTTTTGAAA AGACAAAACT CCTTATAATC AACGTAATTA TTAATAACAA GGAGAAAAAA 60
AGTCCAAAGA AAAAAAAAAG AAAGCTTTTT GGGAACATAA ACACCATCGA AGGAGGGTGG 120
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Nucleotide Fasta Sequence


>IUUC-Ath-007579|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0479--Metal-binding
KW-0519--Myristate
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING
PROSITE

PS50089--ZF_RING_2
SMART

SM00184--RING
Gene Ontology

GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:1901527--P:abscisic acid-activated signaling pathway involved in stomatal movement
GO:0080144--P:amino acid homeostasis
GO:0009737--P:response to abscisic acid
KEGG ath:AT3G09770
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000903 Aegilops tauschii 71.26 8.00e-101 358.00
IUUC-Atr-002864 Amborella trichopoda 66.03 1.00e-96 345.00
IUUC-Aly-005561 Arabidopsis lyrata 90.46 1.00e-150 525.00
IUUC-Bdi-014817 Brachypodium distachyon 68.13 5.00e-100 357.00
IUUC-Bol-015790 Brassica oleracea 83.57 4.00e-119 420.00
IUUC-Bra-017806 Brassica rapa 83.10 3.00e-113 400.00
IUUC-Cme-027249 Cyanidioschyzon merolae 38.11 3.00e-40 158.00
IUUC-Gma-044140 Glycine max 72.91 1.00e-104 372.00
IUUC-Lpe-050811 Leersia perrieri 66.91 2.00e-101 362.00
IUUC-Mtr-058351 Medicago truncatula 69.02 2.00e-102 365.00
IUUC-Mmu-064187 Mus musculus 35.58 3.00e-31 129.00
IUUC-Mac-065591 Musa acuminata 70.08 1.00e-98 352.00
IUUC-Obr-076291 Oryza brachyantha 67.53 2.00e-101 362.00
IUUC-Ogl-077178 Oryza glaberrima 67.28 9.00e-101 359.00
IUUC-Ogu-078712 Oryza glumaepatula 72.11 3.00e-102 364.00
IUUC-Oin-080016 Oryza indica 72.11 3.00e-102 364.00
IUUC-Olo-081031 Oryza longistaminata 70.08 3.00e-100 358.00
IUUC-Ome-081566 Oryza meridionalis 67.28 2.00e-100 358.00
IUUC-Oni-082652 Oryza nivara 67.28 2.00e-100 358.00
IUUC-Oru-084456 Oryza rufipogon 67.28 9.00e-101 359.00
IUUC-Osa-086062 Oryza sativa 72.11 3.00e-102 364.00
IUUC-Ppa-095271 Physcomitrella patens 56.47 2.00e-72 266.00
IUUC-Pop-099088 Populus trichocarpa 72.27 5.00e-107 380.00
IUUC-Ppe-101192 Prunus persica 71.80 9.00e-107 379.00
IUUC-Smo-109530 Selaginella moellendorffii 57.63 1.00e-78 285.00
IUUC-Sit-110038 Setaria italica 69.70 4.00e-102 364.00
IUUC-Sly-110839 Solanum lycopersicum 72.29 4.00e-99 353.00
IUUC-Stu-112804 Solanum tuberosum 73.09 4.00e-100 357.00
IUUC-Sar-113137 Sorex araneus 62.75 1.00e-17 83.20
IUUC-Sbi-114265 Sorghum bicolor 67.92 4.00e-101 360.00
IUUC-Tca-121153 Theobroma cacao 69.55 2.00e-103 368.00
IUUC-Tae-123450 Triticum aestivum 69.12 2.00e-102 365.00
IUUC-Tur-126214 Triticum urartu 68.73 8.00e-102 363.00
IUUC-Vvi-131139 Vitis vinifera 71.89 2.00e-99 355.00
Created Date 25-Jun-2017

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