iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015405

Ensembl Protein ID

Bo4g045710.1

UniProt Accession

A0A0D3BSQ5; A0A0D3BSQ5_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g045710	Bo4g045710.1	Bo4g045710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-34	115.4	672	709
UBD/Beta-Prp	7.40e-64	217.3	548	783

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v+++++ ++  l++s s D ++k+W+l +g++++
   Q: 672  GHSANVNSVCWnPSgELIASVSED-SVKLWSLNSGDCIH 709
           8***********666*********.9***********87 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           h + it+v f p++++lat+s d+tik+wd++++ + +r++ gh+a+v +++f+p++  ++ ++   + i+ w++++  c++++kg + +v   +f+
   Q: 548  HGHIITDVRFRPNSTQLATSSFDKTIKIWDASEPGYfVRTITGHTAPVMSLDFHPKKTdLFCSCNGNNEIRFWNINAANCLRIIKGASTQV---RFQ 641
           56789*************************98876649999**************987799999999******************999877...588 PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsl 200
           p    ++++ + +t+ ++d +++  ++ +l+gh++ vn+v+++p+g l++s s D+ v+lW+l++g+++++l++   ++ +s  f+++ + l+ ++ 
   Q: 642  PRFGQMLAAASENTVSIYDYDNDRRVH-LLKGHSANVNSVCWNPSGELIASVSEDS-VKLWSLNSGDCIHELSS-SGNKFHSCVFHPTFPNLLVIGG 735
           866666666669***************.**************************96.9**************99.********************** PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
            ++++lw+ ++++c +t  +h+  ++ ++ sp +  ++s+s+D+s++iW
   Q: 736  YQSLELWNTKENKC-MTIPAHECVISALAHSPMTGMMASASHDKSVKIW 783
           **********9996.699******************************* PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIYDYL VKKKLHNTAK SFMTEGKVSP DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEAAAAYIE AQQGKAREQQ LQVQQMQMMR QAQMQRRDPS LGGPMNTIGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGA GTAATTGGGA AGCTGATAAG ATGTAAGTGG ATTGTTTTGT TAAAGTGTGT 60
AACTTTTCCA ATTCCAAGAT TCTATTTTTT TTTTTGCTCA CTTTCCTTTT TATGTTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	60.35	9.00e-144	504.00
IUUC-Atr-002717	Amborella trichopoda	65.09	1.00e-149	523.00
IUUC-Bra-016711	Brassica rapa	85.34	0.00e+00	1196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence