iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014834

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100832964; BRADI_3g56640

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G56640	BRADI3G56640.1	BRADI3G56640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-06	26.7	316	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH d  ++ a+ +d + +++G+ D+t+++WD 
   Q: 316  GHHDYSFASAWsPDgRAFATGNQDKTCRIWDA 347
           7888899999**99899**************5 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSNYHDDHVE DMEDDYDMDE PADEMGDGHH ERGIRDSDSE DEEYGQSNDK IPDTSAADAR 60
KGKDIQGIPW ERLAITREKY RQSRLEQYKN YENVPDSGEK AAKECKRTEK GGMYYEFRQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCACCGTCT GTCTCTGACC CACTCCGAGG AACATCGCAA ATAAAACTAA AAATTGTTTT 60
ACGGATAACA ATTAGGGAAG GTAGTTCCGA ACGAGACGAT AAATAGAAAC AAAAAAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR023302--Pept_S9A_N
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

bdi:100832964

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	93.54	0.00e+00	828.00
IUUC-Atr-003022	Amborella trichopoda	74.15	0.00e+00	656.00
IUUC-Aly-006558	Arabidopsis lyrata	71.22	1.00e-175	608.00
IUUC-Ath-006618	Arabidopsis thaliana	70.60	4.00e-175	606.00
IUUC-Bol-015525	Brassica oleracea	71.03	0.00e+00	629.00
IUUC-Bra-016810	Brassica rapa	70.84	0.00e+00	639.00
IUUC-Dse-031456	Dothistroma septosporum	29.97	2.00e-40	159.00
IUUC-Gma-043519	Glycine max	75.06	0.00e+00	657.00
IUUC-Hvu-047189	Hordeum vulgare	87.50	4.00e-178	616.00
IUUC-Lpe-050907	Leersia perrieri	83.15	0.00e+00	738.00
IUUC-Mtr-058694	Medicago truncatula	74.06	0.00e+00	643.00
IUUC-Mac-064914	Musa acuminata	77.59	0.00e+00	684.00
IUUC-Oba-075716	Oryza barthii	89.69	0.00e+00	797.00
IUUC-Obr-076012	Oryza brachyantha	89.81	1.00e-173	601.00
IUUC-Ogl-077272	Oryza glaberrima	87.75	0.00e+00	793.00
IUUC-Ogu-078041	Oryza glumaepatula	89.69	0.00e+00	797.00
IUUC-Oni-082371	Oryza nivara	89.69	0.00e+00	797.00
IUUC-Oru-085156	Oryza rufipogon	88.54	0.00e+00	799.00
IUUC-Osa-086197	Oryza sativa	88.54	0.00e+00	799.00
IUUC-Pop-099666	Populus trichocarpa	76.94	0.00e+00	666.00
IUUC-Smo-109252	Selaginella moellendorffii	57.45	2.00e-147	514.00
IUUC-Sit-110589	Setaria italica	81.01	0.00e+00	716.00
IUUC-Sly-111343	Solanum lycopersicum	72.90	0.00e+00	664.00
IUUC-Stu-112207	Solanum tuberosum	74.50	0.00e+00	656.00
IUUC-Sbi-113791	Sorghum bicolor	88.70	0.00e+00	785.00
IUUC-Tca-121187	Theobroma cacao	73.73	0.00e+00	663.00
IUUC-Tae-122709	Triticum aestivum	82.24	0.00e+00	716.00
IUUC-Tur-126622	Triticum urartu	84.67	0.00e+00	808.00
IUUC-Vvi-131183	Vitis vinifera	70.82	0.00e+00	658.00
IUUC-Yli-134594	Yarrowia lipolytica	30.70	1.00e-37	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence