iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058683

Ensembl Protein ID

KEH44401

UniProt Accession

A0A072W2E3; A0A072W2E3_MEDTR

Genbank Protein ID

KEH44400.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g113000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g113000	KEH44400	KEH44400
MTR_1g113000	KEH44402	KEH44402
MTR_1g113000	KEH44401	KEH44401

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-20	71.7	52	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H + v+ ++f  d ++l+sGsdD  i +WD+ tg++
   Q: 52   HRGCVNTVCFnADgDILLSGSDDRRIILWDWETGRV 87
           999********666*******************987 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MYKRARNSVH KPLRDLSNRE LGHLPARIFP NRLAASEDLV LRLDVFKKLD KHRGCVNTVC 60
FNADGDILLS GSDDRRIILW DWETGRVKLS FHSGHSNNVF QAKFMSHSYD RSIVTCAADG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACAAGA GAGCAAGGAA CAGCGTTCAC AAACCCCTTC GCGATCTCTC CAATCGAGAG 60
CTCGGTCACT TACCTGCCAG AATATTCCCT AACCGCCTCG CCGCCTCCGA GGTCACCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_1g113000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	58.79	8.00e-133	466.00
IUUC-Atr-002714	Amborella trichopoda	61.11	7.00e-142	496.00
IUUC-Aly-005505	Arabidopsis lyrata	65.86	1.00e-155	542.00
IUUC-Ath-007629	Arabidopsis thaliana	63.30	8.00e-154	536.00
IUUC-Bdi-014538	Brachypodium distachyon	61.08	2.00e-140	491.00
IUUC-Bol-015797	Brassica oleracea	64.05	1.00e-154	538.00
IUUC-Bra-017142	Brassica rapa	63.81	3.00e-153	534.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	29.35	2.00e-29	124.00
IUUC-Dre-027731	Danio rerio	39.66	7.00e-76	277.00
IUUC-Gmo-038895	Gadus morhua	39.86	2.00e-76	278.00
IUUC-Gma-044062	Glycine max	81.76	0.00e+00	719.00
IUUC-Hvu-047075	Hordeum vulgare	60.00	5.00e-135	473.00
IUUC-Lpe-051327	Leersia perrieri	59.90	5.00e-138	483.00
IUUC-Mac-065466	Musa acuminata	66.58	2.00e-160	558.00
IUUC-Oan-072748	Ornithorhynchus anatinus	29.39	2.00e-23	102.00
IUUC-Oba-075028	Oryza barthii	61.18	2.00e-140	491.00
IUUC-Obr-076114	Oryza brachyantha	61.46	1.00e-141	495.00
IUUC-Ogl-077918	Oryza glaberrima	61.18	3.00e-140	491.00
IUUC-Ogu-078824	Oryza glumaepatula	61.67	3.00e-141	494.00
IUUC-Oin-080061	Oryza indica	61.18	3.00e-140	491.00
IUUC-Olo-081064	Oryza longistaminata	61.72	2.00e-138	485.00
IUUC-Ome-081405	Oryza meridionalis	61.43	5.00e-141	493.00
IUUC-Oni-082481	Oryza nivara	59.67	2.00e-137	482.00
IUUC-Opu-083681	Oryza punctata	61.43	2.00e-141	494.00
IUUC-Oru-084398	Oryza rufipogon	61.18	3.00e-140	491.00
IUUC-Osa-086227	Oryza sativa	61.18	8.00e-140	489.00
IUUC-Pno-095149	Phaeosphaeria nodorum	40.74	2.00e-17	84.70
IUUC-Ppa-095529	Physcomitrella patens	51.95	1.00e-116	412.00
IUUC-Pop-099784	Populus trichocarpa	70.05	3.00e-174	604.00
IUUC-Ppe-101712	Prunus persica	74.52	0.00e+00	664.00
IUUC-Smo-109128	Selaginella moellendorffii	53.17	4.00e-118	417.00
IUUC-Sit-110744	Setaria italica	57.99	9.00e-137	479.00
IUUC-Sly-111727	Solanum lycopersicum	73.10	0.00e+00	643.00
IUUC-Stu-112421	Solanum tuberosum	71.86	0.00e+00	643.00
IUUC-Sbi-114821	Sorghum bicolor	58.90	3.00e-138	484.00
IUUC-Tca-121555	Theobroma cacao	75.89	0.00e+00	645.00
IUUC-Tae-124601	Triticum aestivum	60.91	7.00e-137	479.00
IUUC-Tur-126617	Triticum urartu	61.46	3.00e-136	477.00
IUUC-Vvi-131540	Vitis vinifera	71.36	1.00e-178	619.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence