iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076183

Ensembl Protein ID

OB07G21010.1

UniProt Accession

J3ML19; J3ML19_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB07G21010	OB07G21010.1	OB07G21010.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	57.71	0.00e+00	806.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MNWDLSQWCP LIDDRCFLSW LVKVPSEQEQ LRARQISAQQ INKVEELWKT NPDASLEDLE 60
KPGVDDEPQQ VALKYEDAYQ YQNVFAPLIK LEADYDKMMK ESQSKDSLTV RWDIGLNKKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGACTTC GTCGAGCACG CCTGCCGGTA CTGCGGGATC CACAACCCCG CGTGCGTCGC 60
GCGCTGCAAC GTGCCGTCCT GCCGCAAGTG GTTCTGCAAC TCGCGGGGGA ACACGTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

PROSITE

PS51192--HELICASE_ATP_BIND_1

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0005829--C:cytosol
GO:0000932--C:P-body
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0003729--F:mRNA binding
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0048571--P:long-day photoperiodism
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009611--P:response to wounding
GO:0009863--P:salicylic acid mediated signaling pathway
GO:0010182--P:sugar mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	91.96	0.00e+00	1838.00
IUUC-Aml-002008	Ailuropoda melanoleuca	69.64	0.00e+00	1105.00
IUUC-Atr-002632	Amborella trichopoda	86.12	0.00e+00	1743.00
IUUC-Apl-003997	Anas platyrhynchos	69.64	0.00e+00	1103.00
IUUC-Aca-004322	Anolis carolinensis	32.97	1.00e-54	207.00
IUUC-Aly-006521	Arabidopsis lyrata	81.01	0.00e+00	1608.00
IUUC-Ath-007059	Arabidopsis thaliana	80.62	0.00e+00	1602.00
IUUC-Ago-007801	Ashbya gossypii	56.76	0.00e+00	798.00
IUUC-Acl-008312	Aspergillus clavatus	67.75	0.00e+00	991.00
IUUC-Afl-008429	Aspergillus flavus	67.19	0.00e+00	989.00
IUUC-Afu-009092	Aspergillus fumigatus	67.75	0.00e+00	992.00
IUUC-Ani-009317	Aspergillus nidulans	67.04	0.00e+00	991.00
IUUC-Ang-009783	Aspergillus niger	67.47	0.00e+00	991.00
IUUC-Aor-010178	Aspergillus oryzae	67.19	0.00e+00	989.00
IUUC-Ate-010294	Aspergillus terreus	67.33	0.00e+00	992.00
IUUC-Ame-010774	Astyanax mexicanus	52.42	0.00e+00	706.00
IUUC-Bgr-012293	Blumeria graminis	66.48	0.00e+00	984.00
IUUC-Bta-012382	Bos taurus	69.64	0.00e+00	1105.00
IUUC-Bci-013937	Botrytis cinerea	66.48	0.00e+00	980.00
IUUC-Bdi-014612	Brachypodium distachyon	93.14	0.00e+00	1854.00
IUUC-Bol-015145	Brassica oleracea	77.39	0.00e+00	1508.00
IUUC-Bra-017370	Brassica rapa	76.29	0.00e+00	1467.00
IUUC-Cel-018240	Caenorhabditis elegans	56.12	0.00e+00	808.00
IUUC-Cja-019892	Callithrix jacchus	70.43	0.00e+00	1112.00
IUUC-Cfa-020700	Canis familiaris	69.64	0.00e+00	1105.00
IUUC-Cpo-021510	Cavia porcellus	71.99	0.00e+00	1104.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	66.76	0.00e+00	960.00
IUUC-Csa-023665	Chlorocebus sabaeus	70.43	0.00e+00	1113.00
IUUC-Cin-025798	Ciona intestinalis	71.12	0.00e+00	989.00
IUUC-Csv-025901	Ciona savignyi	55.50	0.00e+00	997.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	63.94	0.00e+00	951.00
IUUC-Cne-027014	Cryptococcus neoformans	69.17	0.00e+00	1037.00
IUUC-Dre-028705	Danio rerio	73.30	0.00e+00	1107.00
IUUC-Dor-030369	Dipodomys ordii	70.55	0.00e+00	1063.00
IUUC-Dme-031767	Drosophila melanogaster	62.93	0.00e+00	981.00
IUUC-Ete-032800	Echinops telfairi	34.52	2.00e-56	213.00
IUUC-Eca-033840	Equus caballus	70.68	0.00e+00	1112.00
IUUC-Eeu-035137	Erinaceus europaeus	36.17	1.30e-01	30.00
IUUC-Fca-035466	Felis catus	72.03	0.00e+00	1101.00
IUUC-Fal-037548	Ficedula albicollis	70.58	0.00e+00	1107.00
IUUC-Fox-038023	Fusarium oxysporum	64.23	0.00e+00	951.00
IUUC-Gmo-039285	Gadus morhua	71.19	0.00e+00	1088.00
IUUC-Ggr-039810	Gaeumannomyces graminis	62.60	0.00e+00	969.00
IUUC-Gga-040972	Gallus gallus	70.68	0.00e+00	1113.00
IUUC-Gac-042075	Gasterosteus aculeatus	60.41	0.00e+00	1102.00
IUUC-Gma-042713	Glycine max	84.91	0.00e+00	1695.00
IUUC-Ggo-045398	Gorilla gorilla	70.43	0.00e+00	1112.00
IUUC-Hsa-046152	Homo sapiens	70.43	0.00e+00	1113.00
IUUC-Hvu-047555	Hordeum vulgare	97.71	0.00e+00	946.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	72.13	0.00e+00	1102.00
IUUC-Kpa-049205	Komagataella pastoris	49.78	2.00e-179	622.00
IUUC-Lch-049587	Latimeria chalumnae	74.25	0.00e+00	803.00
IUUC-Lpe-051059	Leersia perrieri	95.42	0.00e+00	1845.00
IUUC-Loc-051911	Lepisosteus oculatus	73.26	0.00e+00	1110.00
IUUC-Lma-053007	Leptosphaeria maculans	67.33	0.00e+00	984.00
IUUC-Laf-054234	Loxodonta africana	69.40	0.00e+00	1105.00
IUUC-Mcc-054762	Macaca mulatta	69.40	0.00e+00	1105.00
IUUC-Meu-056677	Macropus eugenii	69.97	8.00e-134	470.00
IUUC-Mor-057147	Magnaporthe oryzae	62.43	0.00e+00	967.00
IUUC-Mpo-057314	Magnaporthe poae	62.60	0.00e+00	970.00
IUUC-Mtr-058329	Medicago truncatula	84.51	0.00e+00	1716.00
IUUC-Mla-059094	Melampsora laricipopulina	64.80	1.00e-136	479.00
IUUC-Mga-060126	Meleagris gallopavo	69.28	0.00e+00	1090.00
IUUC-Mvi-060373	Microbotryum violaceum	72.93	0.00e+00	1074.00
IUUC-Mmr-060628	Microcebus murinus	69.64	0.00e+00	1104.00
IUUC-Mdo-061858	Monodelphis domestica	70.68	0.00e+00	1110.00
IUUC-Mmu-064116	Mus musculus	72.97	0.00e+00	1112.00
IUUC-Mac-065136	Musa acuminata	87.00	0.00e+00	1740.00
IUUC-Mpu-066463	Mustela putorius furo	70.68	0.00e+00	1113.00
IUUC-Mlu-068098	Myotis lucifugus	70.68	0.00e+00	1113.00
IUUC-Nfi-068370	Neosartorya fischeri	67.75	0.00e+00	992.00
IUUC-Ncr-068792	Neurospora crassa	64.98	0.00e+00	964.00
IUUC-Nle-070102	Nomascus leucogenys	70.43	0.00e+00	1112.00
IUUC-Opr-070620	Ochotona princeps	65.95	0.00e+00	1001.00
IUUC-Ont-072685	Oreochromis niloticus	72.59	0.00e+00	1102.00
IUUC-Oan-073665	Ornithorhynchus anatinus	69.46	0.00e+00	1100.00
IUUC-Ocu-074154	Oryctolagus cuniculus	33.56	9.00e-57	214.00
IUUC-Oba-075075	Oryza barthii	95.12	0.00e+00	1850.00
IUUC-Ogl-077691	Oryza glaberrima	99.00	0.00e+00	1950.00
IUUC-Ogu-078423	Oryza glumaepatula	96.91	0.00e+00	1894.00
IUUC-Oin-080107	Oryza indica	99.00	0.00e+00	1949.00
IUUC-Olo-080269	Oryza longistaminata	99.00	0.00e+00	1947.00
IUUC-Ome-081779	Oryza meridionalis	96.71	0.00e+00	1889.00
IUUC-Oni-082366	Oryza nivara	99.00	0.00e+00	1949.00
IUUC-Opu-083958	Oryza punctata	95.32	0.00e+00	1883.00
IUUC-Oru-084182	Oryza rufipogon	99.00	0.00e+00	1948.00
IUUC-Osa-085285	Oryza sativa	98.90	0.00e+00	1947.00
IUUC-Ola-086954	Oryzias latipes	69.40	0.00e+00	1054.00
IUUC-Olu-087685	Ostreococcus lucimarinus	63.20	0.00e+00	904.00
IUUC-Oga-088591	Otolemur garnettii	70.68	0.00e+00	1113.00
IUUC-Oar-089417	Ovis aries	69.51	0.00e+00	1101.00
IUUC-Ptr-091510	Pan troglodytes	72.40	0.00e+00	1094.00
IUUC-Pan-091886	Papio anubis	70.43	0.00e+00	1113.00
IUUC-Psi-093755	Pelodiscus sinensis	71.28	0.00e+00	865.00
IUUC-Pma-094470	Petromyzon marinus	67.65	0.00e+00	1098.00
IUUC-Pno-094963	Phaeosphaeria nodorum	66.90	0.00e+00	980.00
IUUC-Ppa-095479	Physcomitrella patens	77.14	0.00e+00	1503.00
IUUC-Pfo-097456	Poecilia formosa	72.69	0.00e+00	1107.00
IUUC-Pab-098075	Pongo abelii	67.93	0.00e+00	1004.00
IUUC-Pop-099557	Populus trichocarpa	84.00	0.00e+00	1707.00
IUUC-Pca-100717	Procavia capensis	75.93	2.00e-140	493.00
IUUC-Ppe-101675	Prunus persica	85.12	0.00e+00	1746.00
IUUC-Pva-103029	Pteropus vampyrus	74.21	0.00e+00	806.00
IUUC-Pgr-103318	Puccinia graminis	68.95	0.00e+00	1006.00
IUUC-Ptt-103956	Puccinia triticina	69.09	0.00e+00	1008.00
IUUC-Pte-104399	Pyrenophora teres	61.74	0.00e+00	989.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	61.74	0.00e+00	989.00
IUUC-Rno-105784	Rattus norvegicus	72.97	0.00e+00	1112.00
IUUC-Sce-106206	Saccharomyces cerevisiae	57.71	0.00e+00	827.00
IUUC-Sha-106566	Sarcophilus harrisii	69.46	0.00e+00	1099.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	61.93	0.00e+00	899.00
IUUC-Spo-108258	Schizosaccharomyces pombe	59.80	0.00e+00	885.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	62.24	0.00e+00	832.00
IUUC-Sit-109760	Setaria italica	92.85	0.00e+00	1888.00
IUUC-Sly-111807	Solanum lycopersicum	84.19	0.00e+00	1700.00
IUUC-Stu-112869	Solanum tuberosum	83.63	0.00e+00	1519.00
IUUC-Sar-112950	Sorex araneus	32.37	6.00e-43	168.00
IUUC-Sbi-114863	Sorghum bicolor	91.65	0.00e+00	1852.00
IUUC-Sre-115092	Sporisorium reilianum	70.82	0.00e+00	1041.00
IUUC-Ssc-115284	Sus scrofa	36.73	6.30e-02	31.20
IUUC-Tgu-117214	Taeniopygia guttata	66.30	0.00e+00	971.00
IUUC-Tru-118386	Takifugu rubripes	71.89	0.00e+00	1069.00
IUUC-Tsy-119550	Tarsius syrichta	69.23	3.00e-115	408.00
IUUC-Tni-120212	Tetraodon nigroviridis	71.19	0.00e+00	1053.00
IUUC-Tca-121353	Theobroma cacao	85.60	0.00e+00	1735.00
IUUC-Tre-122245	Trichoderma reesei	33.72	9.00e-53	202.00
IUUC-Tvi-122452	Trichoderma virens	63.38	0.00e+00	937.00
IUUC-Tae-123692	Triticum aestivum	93.45	0.00e+00	1849.00
IUUC-Tur-126770	Triticum urartu	80.85	0.00e+00	1706.00
IUUC-Tme-126956	Tuber melanosporum	67.88	0.00e+00	1014.00
IUUC-Tbe-127873	Tupaia belangeri	32.01	9.00e-49	187.00
IUUC-Ttr-128212	Tursiops truncatus	72.55	0.00e+00	1085.00
IUUC-Uma-129327	Ustilago maydis	70.39	0.00e+00	1040.00
IUUC-Vda-129858	Verticillium dahliae	64.02	0.00e+00	922.00
IUUC-Vpa-130743	Vicugna pacos	32.90	7.00e-52	198.00
IUUC-Vvi-131222	Vitis vinifera	85.69	0.00e+00	1721.00
IUUC-Xtr-131800	Xenopus tropicalis	64.72	0.00e+00	849.00
IUUC-Xma-133216	Xiphophorus maculatus	72.69	0.00e+00	1107.00
IUUC-Yli-134482	Yarrowia lipolytica	53.39	0.00e+00	769.00
IUUC-Zma-134802	Zea mays	90.06	0.00e+00	1826.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence