iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111460

Ensembl Protein ID

Solyc10g005920.2.1

UniProt Accession

K4CXC4; K4CXC4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g005920.2	Solyc10g005920.2.1	Solyc10g005920.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-10	41.7	403	434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcl...af.sdtllvsGsdDgtikvW.D 29
           H ++vt+l   ++ + t+lvs+s Dgtik+W D
   Q: 403  HDGEVTDLsmcQWmT-TRLVSASVDGTIKIWeD 434
           899999973325655.99*************55 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASAGNPNQS GGTPSDMHTF FKPSTLVSTN PNTQNPINPN LIPSPFPLAS ASYPPASAGG 60
AGGGTGGSAG GLYYPTQTTP FHLIPQFNHN IPLQYNNHQP QHDGHMHPQR SMSFPAPPLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACTCAATCT TGCACTTAAT CCGATCTCTG TCTCCAAATC CTTCATATAA TCATCTTCTT 60
CATCAAATCT CTCTTCATAT ACTCGTTAAT TGATTCCCTG AATATTGTAT TTTTGTAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

sly:101249682

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	47.81	0.00e+00	1077.00
IUUC-Aly-005827	Arabidopsis lyrata	56.89	0.00e+00	1236.00
IUUC-Bol-015150	Brassica oleracea	53.66	0.00e+00	1139.00
IUUC-Hvu-047656	Hordeum vulgare	47.15	0.00e+00	1090.00
IUUC-Loc-051778	Lepisosteus oculatus	27.12	3.00e-26	114.00
IUUC-Oba-075599	Oryza barthii	49.00	0.00e+00	1087.00
IUUC-Ogu-079010	Oryza glumaepatula	48.92	0.00e+00	1074.00
IUUC-Olo-080788	Oryza longistaminata	49.04	0.00e+00	1093.00
IUUC-Oni-082533	Oryza nivara	48.72	0.00e+00	1077.00
IUUC-Opu-083811	Oryza punctata	48.84	0.00e+00	1083.00
IUUC-Oru-084729	Oryza rufipogon	49.00	0.00e+00	1088.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence