iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050971

Ensembl Protein ID

LPERR12G07310.1

UniProt Accession

A0A0D9XYG0; A0A0D9XYG0_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR12G07310	LPERR12G07310.1	LPERR12G07310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-25	88.5	21	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e flCp+s+++MrdPv+++sG t++r++I k+++++g+      cPvt+++l++++l P+++lr++i++w+++n+
   Q: 21   IYESFLCPLSKQVMRDPVTTESGATFEREAILKYFKECGSggrrlVCPVTQKELSSTELNPSIALRNTIDEWMHRNE 97
           799********************************988888889******************************997 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAEVQDGYFD SSTDSLRVEP IYESFLCPLS KQVMRDPVTT ESGATFEREA ILKYFKECGS 60
GGRRLVCPVT QKELSSTELN PSIALRNTID EWMHRNETAK LEVARKSLTS ECSEGDILQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG TTCAGGATGG CTATTTTGAT TCGTCCACTG ACAGCTTGCG TGTTGAGCCT 60
ATCTATGAAT CGTTCCTATG TCCGCTCTCT AAACAAGTTA TGCGGGATCC TGTCACTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	87.22	0.00e+00	1399.00
IUUC-Atr-002916	Amborella trichopoda	60.93	0.00e+00	938.00
IUUC-Aly-006004	Arabidopsis lyrata	59.64	0.00e+00	836.00
IUUC-Ath-007569	Arabidopsis thaliana	58.86	0.00e+00	819.00
IUUC-Bdi-014487	Brachypodium distachyon	86.21	0.00e+00	1384.00
IUUC-Bol-015955	Brassica oleracea	58.38	0.00e+00	798.00
IUUC-Bra-017058	Brassica rapa	58.43	0.00e+00	806.00
IUUC-Gma-043617	Glycine max	67.17	0.00e+00	1044.00
IUUC-Hvu-047783	Hordeum vulgare	87.47	0.00e+00	1406.00
IUUC-Mtr-058511	Medicago truncatula	66.05	0.00e+00	1034.00
IUUC-Mac-064911	Musa acuminata	65.22	0.00e+00	987.00
IUUC-Oba-075225	Oryza barthii	94.17	0.00e+00	1506.00
IUUC-Obr-076103	Oryza brachyantha	95.53	0.00e+00	1476.00
IUUC-Ogl-077529	Oryza glaberrima	94.04	0.00e+00	1504.00
IUUC-Ogu-078735	Oryza glumaepatula	94.17	0.00e+00	1506.00
IUUC-Oin-079422	Oryza indica	93.80	0.00e+00	1477.00
IUUC-Olo-080644	Oryza longistaminata	86.35	0.00e+00	1351.00
IUUC-Ome-081455	Oryza meridionalis	93.67	0.00e+00	1498.00
IUUC-Oni-082690	Oryza nivara	93.67	0.00e+00	1474.00
IUUC-Opu-083157	Oryza punctata	94.54	0.00e+00	1510.00
IUUC-Oru-085058	Oryza rufipogon	93.80	0.00e+00	1477.00
IUUC-Osa-086000	Oryza sativa	93.80	0.00e+00	1477.00
IUUC-Ppa-096021	Physcomitrella patens	49.24	0.00e+00	718.00
IUUC-Pop-099966	Populus trichocarpa	65.81	0.00e+00	1030.00
IUUC-Ppe-101973	Prunus persica	64.33	0.00e+00	1013.00
IUUC-Smo-109219	Selaginella moellendorffii	47.51	0.00e+00	671.00
IUUC-Sit-110490	Setaria italica	87.39	0.00e+00	1376.00
IUUC-Sly-111702	Solanum lycopersicum	66.19	0.00e+00	961.00
IUUC-Stu-111962	Solanum tuberosum	65.07	0.00e+00	1012.00
IUUC-Tca-121113	Theobroma cacao	67.04	0.00e+00	1056.00
IUUC-Tur-126573	Triticum urartu	86.85	0.00e+00	1398.00
IUUC-Vvi-131623	Vitis vinifera	66.42	0.00e+00	1072.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence