iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099930

Ensembl Protein ID

POPTR_0004s16710.1

UniProt Accession

B9H0V3; B9H0V3_POPTR

Genbank Protein ID

EEE86636.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_859257; POPTR_0004s16710g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s16710	POPTR_0004s16710.1	POPTR_0004s16710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-19	67.9	239	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +vt+++f s+  +++s+s D+t++vW+l++g +++
   Q: 239  GHSKDVTDFDFsSNnQYIASASMDKTVRVWELSKGICIR 277
           8***********555******************999976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHRSLNKMAE QVEEPVDNNS NDKVNNGSTE SNRNENNNNN NDEENKDKKK NVDPELFSCL 60
LQPVTSDSDP DYIGIRRLLL YRKAESGVRR RLDWRCNGKG YTSYRNYIRR PRNWDGLPSH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGAAGTTC AACCCATCAC CGATTAACGG CCATCCCCTC CCTTCCATCA ATCTGCACTC 60
TCTCCCTCCC TCCAGCTCCT CCTTCAAACA TTTATCAAAA CCCTCCCCAC ATTAAAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0004s16710g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	58.50	3.00e-101	361.00
IUUC-Aml-001761	Ailuropoda melanoleuca	39.39	9.00e-55	207.00
IUUC-Atr-002577	Amborella trichopoda	70.90	0.00e+00	682.00
IUUC-Aca-004423	Anolis carolinensis	40.91	1.00e-52	200.00
IUUC-Aly-005453	Arabidopsis lyrata	76.52	0.00e+00	731.00
IUUC-Ath-007256	Arabidopsis thaliana	76.30	0.00e+00	725.00
IUUC-Ame-010600	Astyanax mexicanus	37.99	6.00e-50	191.00
IUUC-Bta-013511	Bos taurus	39.39	8.00e-55	207.00
IUUC-Bdi-014322	Brachypodium distachyon	65.08	1.00e-163	568.00
IUUC-Bol-015992	Brassica oleracea	76.57	0.00e+00	716.00
IUUC-Bra-017399	Brassica rapa	76.92	0.00e+00	705.00
IUUC-Cja-019508	Callithrix jacchus	39.09	1.00e-54	207.00
IUUC-Cfa-020273	Canis familiaris	39.64	1.00e-55	210.00
IUUC-Cpo-022002	Cavia porcellus	39.70	6.00e-55	207.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	27.31	2.00e-16	79.70
IUUC-Csa-023862	Chlorocebus sabaeus	39.39	6.00e-55	207.00
IUUC-Cin-025687	Ciona intestinalis	38.69	2.00e-61	229.00
IUUC-Csv-025992	Ciona savignyi	37.16	7.00e-61	227.00
IUUC-Dre-028697	Danio rerio	37.99	7.00e-52	197.00
IUUC-Dno-029208	Dasypus novemcinctus	39.39	8.00e-55	207.00
IUUC-Dor-030316	Dipodomys ordii	40.00	3.00e-31	129.00
IUUC-Eca-033362	Equus caballus	34.44	2.00e-34	139.00
IUUC-Eeu-034599	Erinaceus europaeus	34.22	3.00e-24	105.00
IUUC-Fca-035874	Felis catus	39.39	1.00e-54	206.00
IUUC-Gmo-039176	Gadus morhua	38.79	9.00e-52	197.00
IUUC-Gga-040458	Gallus gallus	40.50	3.00e-20	90.10
IUUC-Gac-041802	Gasterosteus aculeatus	39.09	8.00e-53	200.00
IUUC-Gma-043284	Glycine max	79.14	0.00e+00	744.00
IUUC-Ggo-045546	Gorilla gorilla	39.70	3.00e-55	208.00
IUUC-Hsa-046407	Homo sapiens	39.70	3.00e-55	208.00
IUUC-Hvu-047726	Hordeum vulgare	63.95	2.00e-155	541.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	39.39	8.00e-55	207.00
IUUC-Lpe-051374	Leersia perrieri	67.69	4.00e-164	570.00
IUUC-Loc-052403	Lepisosteus oculatus	37.08	5.00e-50	191.00
IUUC-Laf-053721	Loxodonta africana	39.39	8.00e-55	207.00
IUUC-Mcc-055449	Macaca mulatta	39.39	7.00e-55	207.00
IUUC-Meu-056487	Macropus eugenii	39.70	4.00e-51	195.00
IUUC-Mtr-058659	Medicago truncatula	73.83	0.00e+00	733.00
IUUC-Mmr-061406	Microcebus murinus	39.39	2.00e-54	205.00
IUUC-Mdo-062331	Monodelphis domestica	39.31	3.00e-45	176.00
IUUC-Mmu-064001	Mus musculus	39.39	2.00e-54	206.00
IUUC-Mac-064934	Musa acuminata	70.65	0.00e+00	667.00
IUUC-Mpu-065871	Mustela putorius furo	39.39	8.00e-55	207.00
IUUC-Mlu-067463	Myotis lucifugus	39.39	2.00e-53	202.00
IUUC-Nle-070136	Nomascus leucogenys	39.39	5.00e-55	208.00
IUUC-Opr-070913	Ochotona princeps	39.70	7.00e-52	197.00
IUUC-Ont-071347	Oreochromis niloticus	38.79	5.00e-53	201.00
IUUC-Oan-073527	Ornithorhynchus anatinus	37.31	4.00e-46	178.00
IUUC-Ocu-074829	Oryctolagus cuniculus	38.76	1.00e-48	187.00
IUUC-Oba-075666	Oryza barthii	66.74	2.00e-167	581.00
IUUC-Obr-076413	Oryza brachyantha	66.81	3.00e-164	571.00
IUUC-Ogl-076998	Oryza glaberrima	68.40	2.00e-166	578.00
IUUC-Ogu-078287	Oryza glumaepatula	66.96	6.00e-168	583.00
IUUC-Oin-079359	Oryza indica	66.52	4.00e-167	580.00
IUUC-Olo-080438	Oryza longistaminata	68.80	1.00e-101	362.00
IUUC-Ome-081328	Oryza meridionalis	66.96	9.00e-172	595.00
IUUC-Oni-082574	Oryza nivara	66.74	2.00e-167	581.00
IUUC-Opu-083376	Oryza punctata	61.64	3.00e-148	517.00
IUUC-Oru-085162	Oryza rufipogon	66.38	5.00e-162	563.00
IUUC-Osa-085507	Oryza sativa	66.38	5.00e-162	563.00
IUUC-Ola-087387	Oryzias latipes	38.18	8.00e-51	194.00
IUUC-Oga-088694	Otolemur garnettii	39.39	9.00e-55	207.00
IUUC-Oar-090355	Ovis aries	39.39	7.00e-55	207.00
IUUC-Ptr-091488	Pan troglodytes	35.75	1.00e-29	123.00
IUUC-Pan-092516	Papio anubis	39.39	5.00e-55	208.00
IUUC-Pma-094572	Petromyzon marinus	37.54	4.00e-57	215.00
IUUC-Ppa-096003	Physcomitrella patens	54.92	2.00e-130	458.00
IUUC-Pfo-096819	Poecilia formosa	39.64	1.00e-50	193.00
IUUC-Pab-098373	Pongo abelii	39.33	3.00e-54	205.00
IUUC-Pca-100248	Procavia capensis	39.09	3.00e-52	199.00
IUUC-Ppe-101592	Prunus persica	79.26	0.00e+00	741.00
IUUC-Pva-102971	Pteropus vampyrus	39.70	9.00e-55	207.00
IUUC-Rno-105386	Rattus norvegicus	39.21	2.00e-53	202.00
IUUC-Sha-107418	Sarcophilus harrisii	39.70	5.00e-51	194.00
IUUC-Smo-108859	Selaginella moellendorffii	52.44	4.00e-130	457.00
IUUC-Sit-109987	Setaria italica	67.18	3.00e-169	587.00
IUUC-Sly-111433	Solanum lycopersicum	80.31	3.00e-158	550.00
IUUC-Stu-112677	Solanum tuberosum	75.54	0.00e+00	733.00
IUUC-Sar-113317	Sorex araneus	53.95	7.00e-20	91.30
IUUC-Sbi-114115	Sorghum bicolor	64.43	6.00e-99	353.00
IUUC-Tru-118749	Takifugu rubripes	39.16	1.00e-51	196.00
IUUC-Tni-119685	Tetraodon nigroviridis	38.86	7.00e-51	194.00
IUUC-Tca-121769	Theobroma cacao	84.60	0.00e+00	793.00
IUUC-Tae-125563	Triticum aestivum	64.36	1.00e-94	338.00
IUUC-Tur-126403	Triticum urartu	59.08	9.00e-101	359.00
IUUC-Tbe-127245	Tupaia belangeri	39.18	3.00e-37	149.00
IUUC-Ttr-128854	Tursiops truncatus	39.70	1.00e-56	213.00
IUUC-Vvi-131113	Vitis vinifera	81.70	0.00e+00	731.00
IUUC-Xtr-132420	Xenopus tropicalis	35.82	1.00e-50	193.00
IUUC-Xma-134302	Xiphophorus maculatus	38.79	9.00e-53	200.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence