iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022937

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD40 repeat protein

Genbank Nucleotide ID

DS496116

Gene Name

CHLREDRAFT_188122

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_188122	EDP06084	EDP06084

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-13	48.8	197	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   afsd.tllvsGsdDgtikvWD 29
           ++ + + l++Gs Dgt+++WD
   Q: 197  SW-SaGSLATGSEDGTVRLWD 216
           57.3378************** PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MVSTDGFDCR SYDLQTYADG IHKKRLERFS TVYACAFVSS TLGNGDAAAS SLALAPSDLL 60
VTASSTGHLR LFRLVDMVTR WTAAGQQSAQ PACSWAAHVG AVYCLATART PRGGDTLLFS 120

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Nucleotide Sequence
(Fasta)

TTTTGTTGTC TTCAGCATAC ACATGCACTT ACACATCGCA TGGAAGCTTG AGGCCCTGTC 60
CAGCACATTT CCAAAAACTG CAGACCTGTT TTTCTGGACA CCTAAGAGCT CGGGGGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cre:CHLREDRAFT_188122

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	27.18	1.00e-12	65.50
IUUC-Aly-006385	Arabidopsis lyrata	25.00	2.00e-12	65.10
IUUC-Gma-043171	Glycine max	23.40	7.00e-14	69.70
IUUC-Lpe-051203	Leersia perrieri	28.00	1.00e-10	58.90
IUUC-Mac-065134	Musa acuminata	26.57	5.00e-16	77.00
IUUC-Oba-075175	Oryza barthii	28.40	3.00e-10	57.80
IUUC-Obr-076393	Oryza brachyantha	29.02	2.00e-11	61.20
IUUC-Ogu-078211	Oryza glumaepatula	28.40	3.00e-10	57.80
IUUC-Oin-079554	Oryza indica	28.40	3.00e-10	57.40
IUUC-Oni-082376	Oryza nivara	28.40	3.00e-10	57.80
IUUC-Opu-083163	Oryza punctata	28.40	5.00e-11	60.10
IUUC-Oru-084311	Oryza rufipogon	28.40	5.00e-10	57.00
IUUC-Pma-094236	Petromyzon marinus	25.58	6.00e-08	49.70
IUUC-Pop-099433	Populus trichocarpa	25.06	7.00e-14	69.70
IUUC-Ppe-101677	Prunus persica	26.96	3.00e-20	90.90
IUUC-Tur-126015	Triticum urartu	26.19	4.00e-04	35.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence