iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126103

Ensembl Protein ID

TRIUR3_33222-P1

UniProt Accession

M7ZZZ7; M7ZZZ7_TRIUA

Genbank Protein ID

EMS65587.1

Protein Name

Coatomer subunit beta'-2

Genbank Nucleotide ID

KD042266

Gene Name

TRIUR3_33222

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_33222	TRIUR3_33222-T1	TRIUR3_33222-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-31	107.9	234	275
UBD/Beta-Prp	1.20e-62	212.5	49	339

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 234  GHSKGVNCVDYftgGDrPFLITGSDDQTAKVWDYQTKSCVQT 275
           8********966997789******************999986 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl.................lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           ++++++ + +p +++++++ ++g++ +w+++t+                   ++s++  e +v++ kf+ ++++ v g++D++i+v++++t + 
   Q: 49   SERVKSADLHPTEPWILSSLYSGSVCIWNYQTQLNsmkiisnddgvhlfltmVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDK 142
           667899999***********************888888888888888888888888888888******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           v ++++h+d++++++++p++ +++s s+d  i++wd+++g+   ++++gh++ v+ v+++p++ n ++s+slDrt+++W++ + +   tl g h
   Q: 143  VKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWDKGWACTHIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWSIGSPDPNFTLDG-H 235
           *****************************************9989**********************************************9.* PP
   S: 180  tdsvysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
            + v++++     ++++l++gs+d+t k+wd+qt++cv+tl+gh  nv+ v f+p+  ++++gs+Dg++r+W +++  l +tl++  ++v++  
   Q: 236  SKGVNCVDyfTGGDRPFLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELPIIITGSEDGTVRLWHSTTYRLENTLNYGLERVWALG 329
           ********7445566****************************************************************************999 PP
   S: 272  vlsfgdnvlv 281
           +++ ++++++
   Q: 330  YMKGSRRIVI 339
           9666666653 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MAVNVAAAPV GYQGNRDASY WDLLGECLVW CRLCRFCVWL DQRKLAQRSE RVKSADLHPT 60
EPWILSSLYS GSVCIWNYQT QLNSMKIISN DDGVHLFLTM VKSFEVTELP VRSAKFIARK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTGA ATGTGGCAGC CGCTCCGGTT GGATATCAAG GTAATCGCGA TGCCTCTTAC 60
TGGGATCTAC TCGGTGAATG TCTGGTGTGG TGTCGCTTAT GTCGGTTTTG TGTTTGGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000222	Aegilops tauschii	92.56	0.00e+00	1414.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	63.98	0.00e+00	784.00
IUUC-Csa-023383	Chlorocebus sabaeus	59.54	0.00e+00	727.00
IUUC-Ete-033166	Echinops telfairi	51.59	2.00e-173	602.00
IUUC-Hvu-047669	Hordeum vulgare	95.07	0.00e+00	721.00
IUUC-Oin-079484	Oryza indica	81.21	0.00e+00	1338.00
IUUC-Oni-082509	Oryza nivara	86.60	0.00e+00	1318.00
IUUC-Pno-094785	Phaeosphaeria nodorum	39.47	2.00e-97	348.00
IUUC-Tsy-118824	Tarsius syrichta	54.42	0.00e+00	643.00
IUUC-Tbe-127770	Tupaia belangeri	55.75	0.00e+00	667.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence