iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__3276__AT5G41350.1	fgenesh2_kg.7__3276__AT5G41350.1	fgenesh2_kg.7__3276__AT5G41350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-08	34.9	161	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++  +++ lv  C H+fh+ C+  w        ++ +CP+C+
   Q: 161  CPICLEEYdiENPKLVAKCDHHFHLACILEW------MERSETCPVCN 202
           ******997677555677*************......**********7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGGCCCCSSS RRADVDNGPA YYYYPRATEE RVPLSSAHNR TSSAISTGVV VVDTNLETSS 60
PDAYIPPPLP IPFDVAIGVP QTPASAEEAT CVDIREVSVD SANTESAQET VDGITIGVPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATTTCTAA GGAAAGTCAT TTTGATAGAG CGCACGATAA ACAGCACCGC AAAAGCACAC 60
AAGCAGAGAA GGACGAAGAC AAAACAAAAA CAAAAAGCTT CTCCGGAGAA AAAAAGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005739--C:mitochondrion
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_493843

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000389	Aegilops tauschii	42.78	2.00e-32	131.00
IUUC-Atr-002805	Amborella trichopoda	43.98	1.00e-31	129.00
IUUC-Ath-006898	Arabidopsis thaliana	96.50	2.00e-100	357.00
IUUC-Bdi-014710	Brachypodium distachyon	44.02	3.00e-38	150.00
IUUC-Bol-015746	Brassica oleracea	86.51	1.00e-83	301.00
IUUC-Bra-017455	Brassica rapa	85.58	1.00e-85	308.00
IUUC-Gma-044261	Glycine max	54.79	7.00e-51	192.00
IUUC-Hvu-047682	Hordeum vulgare	43.84	2.00e-37	147.00
IUUC-Mtr-057775	Medicago truncatula	50.23	7.00e-39	152.00
IUUC-Mac-065486	Musa acuminata	44.50	7.00e-46	176.00
IUUC-Oba-075793	Oryza barthii	37.37	2.00e-31	127.00
IUUC-Obr-076796	Oryza brachyantha	41.23	6.00e-38	149.00
IUUC-Ogl-077552	Oryza glaberrima	36.92	8.00e-32	129.00
IUUC-Ogu-078163	Oryza glumaepatula	37.37	2.00e-31	127.00
IUUC-Oin-079978	Oryza indica	36.92	8.00e-32	129.00
IUUC-Ome-081206	Oryza meridionalis	38.78	6.00e-32	129.00
IUUC-Oni-082498	Oryza nivara	37.37	2.00e-31	127.00
IUUC-Oru-084462	Oryza rufipogon	37.37	2.00e-31	127.00
IUUC-Osa-085799	Oryza sativa	36.92	8.00e-32	129.00
IUUC-Olu-087706	Ostreococcus lucimarinus	36.24	4.00e-15	73.20
IUUC-Pop-099294	Populus trichocarpa	50.49	2.00e-39	154.00
IUUC-Ppe-101765	Prunus persica	52.78	2.00e-45	174.00
IUUC-Sit-110172	Setaria italica	41.18	4.00e-32	129.00
IUUC-Sly-111149	Solanum lycopersicum	40.45	6.00e-37	146.00
IUUC-Stu-111977	Solanum tuberosum	41.98	1.00e-36	145.00
IUUC-Sbi-114500	Sorghum bicolor	41.15	4.00e-37	146.00
IUUC-Tca-121372	Theobroma cacao	52.56	5.00e-43	166.00
IUUC-Tae-124908	Triticum aestivum	43.27	1.00e-38	151.00
IUUC-Vvi-130993	Vitis vinifera	52.91	2.00e-49	188.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence