iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114219

Ensembl Protein ID

Sb01g014120.1

UniProt Accession

C5WS52; C5WS52_SORBI

Genbank Protein ID

EER93778.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G161500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g014120	Sb01g014120.1	Sb01g014120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.50e-16	60.5	135	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt..lt....elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           +vkvs++g+++++++dl+ + ++++L++a+++  +     + + se+a++YeD+dGDl+ l++D++++++ s       +++l+i+k
   Q: 135  FVKVSMDGAPYLRKVDLRMYKGYRELREALEAmfVSsnsgSANLSEFAVTYEDKDGDLM-LVGDVPFEMFTS------TCKKLRIMK 214
           8*******************************762255556666***************.************......9******98 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

METTVVGDLM ATELRLGLPG TVDDSCSLQS QVKATTPRGK KRATTDAAVE DAAAAEEATN 60
KRDDAEAAPP AAKAPVVGWP PVRSYRKSCF QQAISSKQQV SKQAAKDEAA AASPSCTAPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACCA CCGTTGTGGG AGACCTCATG GCGACCGAGC TGAGGCTTGG ACTGCCGGGC 60
ACCGTCGACG ACAGCTGCAG CCTGCAGAGC CAGGTGAAGG CGACGACGCC TAGGGGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_01g014120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	56.50	2.00e-53	200.00
IUUC-Lpe-051475	Leersia perrieri	59.17	1.00e-54	204.00
IUUC-Oba-075812	Oryza barthii	62.27	1.00e-57	215.00
IUUC-Obr-076144	Oryza brachyantha	62.34	7.00e-58	215.00
IUUC-Ogl-077720	Oryza glaberrima	62.27	1.00e-57	215.00
IUUC-Ogu-078185	Oryza glumaepatula	62.27	2.00e-55	207.00
IUUC-Oin-079692	Oryza indica	62.27	1.00e-57	215.00
IUUC-Opu-083449	Oryza punctata	62.03	2.00e-54	205.00
IUUC-Oru-084430	Oryza rufipogon	62.27	1.00e-57	215.00
IUUC-Osa-085715	Oryza sativa	62.27	1.00e-57	215.00
IUUC-Sit-109769	Setaria italica	66.08	2.00e-64	237.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence