iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112887

Ensembl Protein ID

PGSC0003DMT400013662

UniProt Accession

M1A356; M1A356_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005338	PGSC0003DMT400013662	PGSC0003DMT400013662

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.50e-17	64.8	93	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt............elknsevalkYeDedGDlvtlksDedldkavsllaskksll 77
           + vkvs++g+++++++dl+++ ++++Llka++  ++              ++s++ l+YeD+dGD++ l++D++ld+++       s++
   Q: 93   MYVKVSMDGAPYLRKIDLRVYKNYQELLKALEFmFKhpigvylekegyTTSGSDYVLTYEDKDGDWM-LVGDVPLDMFIN------SCK 174
           579******************************64479999999**888888***************.************......*** PP
   S: 78   rlliqk 83
           rl+i+k
   Q: 175  RLRIMK 180
           *****8 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MATIYENNDL ATELRLGLPG TTDKPKTQVS STSTNKRSLS EMDSSSNIIN QNDQQDSSPP 60
PKVQIVGWPP VRSYRKNVIV QAKISNIDVS LGMYVKVSMD GAPYLRKIDL RVYKNYQELL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGATAGCT AACAAATTCT TCACCGGAAA AAGTAGCCGT TGCTGGACAT ACGCCGGAGA 60
AAAAAAGGGT TATCAACAAC AAAGTACTCA TCAAATTCTA TATAATATAT ATAGTCATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sot:102587488

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	45.37	6.00e-42	162.00
IUUC-Cel-018552	Caenorhabditis elegans	35.48	8.80e-02	28.50
IUUC-Sce-106423	Saccharomyces cerevisiae	36.17	1.20e+00	28.90

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence