iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080830

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN541083.1_FG001	KN541083.1_FGT001	KN541083.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.60e-08	33.8	398	439

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++  k+++ +l+CgH +h+dC+++w       + + +CP+C+
   Q: 398  CIICQEEYqvKECVGTLDCGHRYHEDCIKQW------LMVKNLCPICK 439
           ********98666999***************......999*******6 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAYRNTVCTP QVIDLETEQG HSHIHSESFN RTGNDSSDQG AQHAVRGVGN ATNIGLSDMR 60
SYYDAGMNHP HQPVHNLPPN LGVDSGFVFP SSMYNPCMST TSMNRYVSHT QSFGLPSNQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATATA GAAATACGGT ATGCACTCCC CAAGTAATTG ATCTAGAAAC TGAACAAGGG 60
CACTCTCATA TTCATTCTGA AAGTTTTAAT CGCACTGGGA ATGATTCATC CGACCAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000861	Aegilops tauschii	63.78	4.00e-110	391.00
IUUC-Atr-002953	Amborella trichopoda	48.15	7.00e-38	150.00
IUUC-Gma-043333	Glycine max	50.77	1.00e-38	152.00
IUUC-Lpe-051051	Leersia perrieri	71.65	0.00e+00	674.00
IUUC-Oba-075052	Oryza barthii	79.88	0.00e+00	767.00
IUUC-Obr-076274	Oryza brachyantha	90.55	7.00e-144	503.00
IUUC-Ogl-077324	Oryza glaberrima	78.20	0.00e+00	751.00
IUUC-Ogu-078173	Oryza glumaepatula	80.08	0.00e+00	770.00
IUUC-Oin-079682	Oryza indica	78.01	0.00e+00	753.00
IUUC-Ome-081865	Oryza meridionalis	77.45	0.00e+00	731.00
IUUC-Oni-082807	Oryza nivara	79.50	0.00e+00	763.00
IUUC-Opu-083300	Oryza punctata	72.48	3.00e-162	564.00
IUUC-Oru-084217	Oryza rufipogon	78.39	0.00e+00	757.00
IUUC-Osa-086172	Oryza sativa	78.24	0.00e+00	757.00
IUUC-Pop-099935	Populus trichocarpa	50.75	2.00e-39	155.00
IUUC-Sly-111252	Solanum lycopersicum	51.80	1.00e-40	160.00
IUUC-Stu-112453	Solanum tuberosum	51.80	3.00e-40	159.00
IUUC-Tca-121540	Theobroma cacao	52.45	6.00e-41	160.00
IUUC-Tae-125006	Triticum aestivum	59.68	3.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence