iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005462

Ensembl Protein ID

Al_scaffold_0008_3303

UniProt Accession

D7MMZ7; D7MMZ7_ARALL

Genbank Protein ID

EFH43023.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_686483

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0008_3303	Al_scaffold_0008_3303	Al_scaffold_0008_3303

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-16	60.5	33	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           ++++++++f  ++t +v++sdD +i+++D+ + ++lk+
   Q: 33   NCRISSIDFhkTSTCMVTASDDDSIRLYDVASATCLKT 70
           578*******755999*****************99985 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVEFTEREDR VSLELSEEII QSMEPGAVFR DYNCRISSID FHKTSTCMVT ASDDDSIRLY 60
DVASATCLKT INSKKYGVDL VCFTSHPTTV IYSSRNGWDD SLRLLSLHDN KYLRYFKGHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGAAT TTACAGAGAG AGAGGACCGA GTTTCTTTGG AACTCAGCGA AGAAATTATA 60
CAGAGCATGG AACCTGGCGC CGTTTTCAGA GACTATGTAA TACTATCTCC TTCCCTTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009827--P:plant-type cell wall modification

KEGG

aly:ARALYDRAFT_686483

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	66.36	4.00e-133	466.00
IUUC-Atr-002607	Amborella trichopoda	75.00	5.00e-146	509.00
IUUC-Apl-003817	Anas platyrhynchos	42.05	1.00e-62	233.00
IUUC-Ath-006609	Arabidopsis thaliana	98.49	0.00e+00	676.00
IUUC-Bdi-014222	Brachypodium distachyon	66.36	2.00e-131	461.00
IUUC-Bol-015485	Brassica oleracea	90.85	3.00e-176	609.00
IUUC-Bra-016914	Brassica rapa	90.85	1.00e-175	608.00
IUUC-Cho-024409	Choloepus hoffmanni	37.13	7.00e-47	180.00
IUUC-Cme-027288	Cyanidioschyzon merolae	32.08	6.00e-49	187.00
IUUC-Eeu-035229	Erinaceus europaeus	35.10	4.00e-46	177.00
IUUC-Fal-036843	Ficedula albicollis	42.05	1.00e-62	233.00
IUUC-Gma-042835	Glycine max	80.79	2.00e-157	547.00
IUUC-Hvu-047690	Hordeum vulgare	65.44	3.00e-131	460.00
IUUC-Lch-050431	Latimeria chalumnae	40.78	6.00e-63	234.00
IUUC-Lpe-050812	Leersia perrieri	66.67	3.00e-127	446.00
IUUC-Laf-054265	Loxodonta africana	46.00	6.00e-50	190.00
IUUC-Mtr-058607	Medicago truncatula	77.13	3.00e-151	526.00
IUUC-Mac-064497	Musa acuminata	73.37	2.00e-141	494.00
IUUC-Oba-075229	Oryza barthii	66.97	2.00e-128	452.00
IUUC-Obr-076490	Oryza brachyantha	68.01	6.00e-129	452.00
IUUC-Ogl-077381	Oryza glaberrima	67.49	5.00e-127	446.00
IUUC-Ogu-078068	Oryza glumaepatula	67.81	7.00e-128	449.00
IUUC-Oin-079415	Oryza indica	67.27	2.00e-128	451.00
IUUC-Olo-080773	Oryza longistaminata	57.81	2.00e-103	368.00
IUUC-Ome-081277	Oryza meridionalis	54.97	5.00e-94	336.00
IUUC-Oni-082990	Oryza nivara	67.27	7.00e-129	453.00
IUUC-Opu-083374	Oryza punctata	66.77	9.00e-128	448.00
IUUC-Oru-084354	Oryza rufipogon	67.27	7.00e-129	453.00
IUUC-Osa-086154	Oryza sativa	67.70	2.00e-128	451.00
IUUC-Psi-092972	Pelodiscus sinensis	41.58	4.00e-61	228.00
IUUC-Pop-099278	Populus trichocarpa	82.85	1.00e-152	531.00
IUUC-Ppe-101860	Prunus persica	81.50	3.00e-158	550.00
IUUC-Pte-104129	Pyrenophora teres	33.33	4.00e-40	159.00
IUUC-Sit-110657	Setaria italica	66.25	1.00e-129	454.00
IUUC-Sly-110867	Solanum lycopersicum	81.04	8.00e-158	548.00
IUUC-Sbi-114094	Sorghum bicolor	67.18	2.00e-130	457.00
IUUC-Tsy-119314	Tarsius syrichta	33.33	6.00e-33	133.00
IUUC-Tca-121499	Theobroma cacao	79.06	6.00e-162	563.00
IUUC-Tae-124779	Triticum aestivum	66.36	4.00e-133	466.00
IUUC-Tur-126512	Triticum urartu	68.21	8.00e-117	412.00
IUUC-Vvi-131040	Vitis vinifera	83.49	7.00e-165	572.00
IUUC-Xtr-132660	Xenopus tropicalis	40.78	4.00e-64	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence