iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100087

Ensembl Protein ID

POPTR_0008s22590.1

UniProt Accession

B9N515; B9N515_POPTR

Genbank Protein ID

ERP57970.1

Protein Name

Cullin-like protein1

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_828007; POPTR_0008s22590g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s22590	POPTR_0008s22590.1	POPTR_0008s22590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	2.00e-151	506.9	25	647

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 2    lreavkkilrqesvkkeyeelytavynlclsk....vgaklYkklkevleefi.kqvkkkveesedeqlLktynreWekfreqlkvlrkif 87
           l+++++ +++ + + ++y+ lyt +yn+c++k    ++++lY+k +e  ee+i   v  +  e++de +L+ +++ W +++  +  l + f
   Q: 25   LKNILEGLQEPQFSSEDYMMLYTTIYNMCTQKpphdYSQQLYDKYRESFEEYItSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFF 115
           78999999999999******************9*99*****************9899********************************** PP
   S: 88   ayldrtyvkkskkvsevrkLaldlwrkeivedikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqe 178
            yldr+++ + +++ + ++++l  +r+ + ++++ ++ ++++ li +eR+ge++dr ll++v   +ve+++ +   y+++FEa+ l+ t+ 
   Q: 116  HYLDRYFIAR-RSLPPLNEVGLTCFRDLVYQELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFEAAMLKDTAA 205
           **********.9******************************************************************************* PP
   S: 179  fykaesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll....aelvallrdkktedlsrmykLlsrv 265
           +y++++++ +   ++ +Y+ k+e+ l+ e++r+++yl++s+e kLle+v++el++ ++++ll    ++++allrd+k edlsrm++L+s++
   Q: 206  YYSRKASNWILDDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYATQLLekehSGCHALLRDDKVEDLSRMFRLFSKI 296
           ************************************************************9999999************************ PP
   S: 266  lngleellkeleshikeqgkaaltaeekek.............dpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvl 343
           + gl+++ + +++h+  +g+a++ ++e +              + + +V++++el++k+   v+ +F+n + F kal++afe f nk   +
   Q: 297  PRGLDPVSGIFKQHVTAEGTALVKQAEDAAsnkkadkkdvvglQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFCNKG--V 385
           ************************4444434577889999999779******************************************..7 PP
   S: 344  kaakspEllAryiDqlLrks.skglteeeleaqldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftsk 433
             + s+EllA ++D+ L+k+ s +l +e +e++l+kv+ ++ yis+kd+F ++Y+k La+RLl +ksa ++ E+s+++kLk++cg +ftsk
   Q: 386  AGSSSAELLATFCDNILKKGgSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSK 476
           779999************************************************************************************* PP
   S: 434  LerMfqdlkvSedlnrqFkeeken.teesesvelsvlvLsagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgraelk 523
           +e+M++dl + ++ ++ F+e  +n  +++++++l+v vL++g+Wp + +   ++LPae+ k +e f+efY+ k ++RkL+W ++lg+++l 
   Q: 477  MEGMVTDLTLARENQTSFEEYLSNnPNANPGIDLTVTVLTTGFWPSYKSFD-LNLPAEMVKCVEVFREFYQIKTKHRKLTWIYSLGTCNLI 566
           *******************9876515778******************7755.*************************************** PP
   S: 524  aelkkgkyelqVstfQmavLLafnnsekvsveelkkatelpeeeLrrtlqsLvsskkqvlkkepeskeieeedlfsvNqef 604
            ++++++ el V+t+Q+  LL+fn s+++s+ e+  + +l +++  r l sL + k ++l+kep++k i+ +d f +N++f
   Q: 567  GKFEQKTMELIVTTYQASALLLFNSSDRLSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKIISPTDHFEFNSKF 647
           ******************************************************************************998 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAINERKTID LEQGWEFMQK GITKLKNILE GLQEPQFSSE DYMMLYTTIY NMCTQKPPHD 60
YSQQLYDKYR ESFEEYITST VLPSLREKHD EFMLRELVKR WANHKVMVRW LSRFFHYLDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACACTACCA AACATTTCTT TGGAAAATAA TCAACTCCGC CAAACAAACA AGGTGTAAGT 60
GAATAATTAA GAGAAGAAAA TGGGAGGATC CAAGAACTGA ATGGAACAAA ACAAGGCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s22590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000358	Aegilops tauschii	81.87	0.00e+00	1264.00
IUUC-Aly-005410	Arabidopsis lyrata	83.65	0.00e+00	1286.00
IUUC-Ath-006626	Arabidopsis thaliana	83.65	0.00e+00	1284.00
IUUC-Ago-007977	Ashbya gossypii	23.88	6.00e-63	235.00
IUUC-Bdi-014240	Brachypodium distachyon	87.50	0.00e+00	1338.00
IUUC-Bol-016015	Brassica oleracea	83.65	0.00e+00	1288.00
IUUC-Bra-017658	Brassica rapa	83.78	0.00e+00	1284.00
IUUC-Cre-022585	Chlamydomonas reinhardtii	66.09	0.00e+00	975.00
IUUC-Csv-026083	Ciona savignyi	31.46	3.00e-103	369.00
IUUC-Gma-044070	Glycine max	93.95	0.00e+00	1435.00
IUUC-Hvu-047383	Hordeum vulgare	87.10	0.00e+00	1339.00
IUUC-Lpe-051606	Leersia perrieri	87.53	0.00e+00	1320.00
IUUC-Mtr-057953	Medicago truncatula	92.59	0.00e+00	1406.00
IUUC-Mla-059021	Melampsora laricipopulina	31.55	2.00e-94	339.00
IUUC-Mac-065440	Musa acuminata	93.15	0.00e+00	1417.00
IUUC-Oba-075744	Oryza barthii	87.37	0.00e+00	1335.00
IUUC-Obr-076289	Oryza brachyantha	87.84	0.00e+00	1312.00
IUUC-Ogl-077579	Oryza glaberrima	83.74	0.00e+00	1279.00
IUUC-Ogu-078249	Oryza glumaepatula	86.80	0.00e+00	1333.00
IUUC-Oin-079171	Oryza indica	83.74	0.00e+00	1279.00
IUUC-Olo-080532	Oryza longistaminata	86.93	0.00e+00	1334.00
IUUC-Ome-081358	Oryza meridionalis	86.93	0.00e+00	1334.00
IUUC-Oni-082083	Oryza nivara	86.93	0.00e+00	1334.00
IUUC-Opu-083214	Oryza punctata	88.17	0.00e+00	1346.00
IUUC-Oru-085124	Oryza rufipogon	86.93	0.00e+00	1334.00
IUUC-Osa-085572	Oryza sativa	87.63	0.00e+00	1340.00
IUUC-Ppa-095910	Physcomitrella patens	83.42	0.00e+00	1258.00
IUUC-Ppe-101405	Prunus persica	95.16	0.00e+00	1451.00
IUUC-Sce-106293	Saccharomyces cerevisiae	24.00	6.00e-62	231.00
IUUC-Sit-110264	Setaria italica	84.99	0.00e+00	1211.00
IUUC-Sly-111067	Solanum lycopersicum	94.07	0.00e+00	1425.00
IUUC-Stu-112374	Solanum tuberosum	84.82	0.00e+00	1251.00
IUUC-Sbi-114502	Sorghum bicolor	87.63	0.00e+00	1342.00
IUUC-Sre-114984	Sporisorium reilianum	29.95	3.00e-85	309.00
IUUC-Tca-121586	Theobroma cacao	97.04	0.00e+00	1438.00
IUUC-Tae-125618	Triticum aestivum	83.81	0.00e+00	1323.00
IUUC-Tur-126475	Triticum urartu	77.89	0.00e+00	1246.00
IUUC-Vvi-131423	Vitis vinifera	95.97	0.00e+00	1453.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence