iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113959

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G031800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g002737	Sb08g002737.1	Sb08g002737.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-06	27.7	99	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPl 44
           CaiCl  f+dg    v+p C H fh+dC+ +w     +  ++ +CPl
   Q: 99   CAICLGQFEDGdrCSVMPiCHHEFHRDCIANW-----LLAQHNTCPL 140
           ********77743455779*************.....8999999*97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDSDWVIFLV WGSGLLFFVV IPSARACYRN CIREDGGGPP PANEAAAVHR RILLRLDKVT 60
YPRQNSLPAS TTSGLGGGGR PSTTTAAGTA AAAAEEEDCA ICLGQFEDGD RCSVMPICHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAG ACTGGGTGAT TTTCCTCGTT TGGGGCAGCG GCTTACTTTT CTTCGTCGTC 60
ATACCAAGCG CGCGGGCCTG CTACAGAAAT TGCATCCGGG AGGACGGCGG CGGCCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0043231--C:intracellular membrane-bounded organelle
GO:0004519--F:endonuclease activity
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding
GO:0009451--P:RNA modification

KEGG

sbi:SORBI_08g002705

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence