iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099874

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-CONJUGATING ENZYME 17 family protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_814585; POPTR_0005s12060g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s12060	POPTR_0005s12060.1	POPTR_0005s12060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.80e-34	118.2	19	141

Active Site

Position(s)	Description	Evidence
99	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk.ifhPnvyenGkvClsilkeee 90
           Rl+kel e++ +pp+g++ k++d+  l++w ++++G ++t Y++++++l+++fpe+YP+++P+v fl +  +hP++y+nG++Cl+il   +
   Q: 19   RLQKELVEWQVNPPTGFKHKVTDN--LQRWVIEVIGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPaPLHPHIYSNGHICLDILY--D 105
           9****************9998887..*****************************************9989****************9..* PP
   S: 91   kWspalsvesvllsiqsllae.pnpesplneeaael 125
            Wspa++v+sv++si s+l++    + p +++ + +
   Q: 106  SWSPAMTVSSVCISILSMLSSsTVKQRPEDNDRYVK 141
           *******************65266677877776533 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTSSSTTTRK ALSKIACNRL QKELVEWQVN PPTGFKHKVT DNLQRWVIEV IGAPGTLYAN 60
ETYQLQVDFP EHYPMEAPQV IFLHPAPLHP HIYSNGHICL DILYDSWSPA MTVSSVCISI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACACAAAT CATTCTATAC CCGTCATTAT AAACCGTCGC TGGTTCTCTT TGTTCCTTTA 60
TCTAACACCC CTTCACACCA ACAAATAACT CTCTCTCAAA AGTTACCTTT GCAACCATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

pop:POPTR_0005s12060g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000363	Aegilops tauschii	79.50	5.00e-74	270.00
IUUC-Atr-002673	Amborella trichopoda	89.74	3.00e-39	153.00
IUUC-Ath-007383	Arabidopsis thaliana	90.68	9.00e-79	285.00
IUUC-Bra-017578	Brassica rapa	90.06	4.00e-77	279.00
IUUC-Gma-043703	Glycine max	94.41	1.00e-81	294.00
IUUC-Ppa-095456	Physcomitrella patens	82.72	2.00e-68	251.00
IUUC-Smo-108745	Selaginella moellendorffii	82.91	9.00e-70	254.00
IUUC-Sly-111213	Solanum lycopersicum	90.68	7.00e-80	288.00
IUUC-Tca-121226	Theobroma cacao	96.27	2.00e-75	273.00
IUUC-Vvi-131254	Vitis vinifera	95.03	5.00e-82	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence