iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle +   +d ++ +p C H fh+ Cl  w     +++ + +CPlCr
   Q: 160  CAICLENLlrsED-YCEMPtCSHYFHEPCLTEW-----LTRDNNSCPLCR 203
           ******9988666.999999*************.....899999*****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

METESFKLDV HVQALSQDQS LGFVSTVLIS QYREVEEFLI NEKDDTVTSL GSYPEDSSTS 60
HDPLISLKLP SFKPNDVYQR LQTHLHDHDL SEQLSYKIVQ AQQRQKRQSF YLPQQRPLFM 120

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Nucleotide Sequence
(Fasta)

ATGGAAACAG AATCTTTCAA ACTCGATGTT CATGTACAAG CTTTGTCTCA AGATCAGTCG 60
TTAGGGTTCG TAAGTACGGT ACTAATCAGT CAATACAGAG AAGTAGAGGA ATTTCTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G28620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000908	Aegilops tauschii	39.13	1.00e-11	60.10
IUUC-Aly-006257	Arabidopsis lyrata	78.37	7.00e-85	305.00
IUUC-Bol-015286	Brassica oleracea	40.76	4.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence