iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099281

Ensembl Protein ID

POPTR_0009s00760.1

UniProt Accession

B9HQR5; B9HQR5_POPTR

Genbank Protein ID

EEE87508.2

Protein Name

Vacuolar assembly family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_833340; POPTR_0009s00760g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s00760	POPTR_0009s00760.1	POPTR_0009s00760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-07	30.1	93	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikv 27
           Ht+ v++l+f  +  ++ s+sdDgt+ +
   Q: 93   HTAVVNDLSFdVEgEYIGSCSDDGTVVI 120
           9*********9556***********987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTPITSENGV DGDDEREEDD EEDEEQEEEE EEEQEEEPRL KYQRMGGSIP TLLSSDAASC 60
IAVAERMIAL GTLDGTVHIL DFLGNQVKEF AAHTAVVNDL SFDVEGEYIG SCSDDGTVVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCAAGGTA TAATTTACTC TTTAACTACC ACTACCACCA TCAACCCAAC CCAACCCAAA 60
CACACAGATC TCTCTGTCTC CATCATTTCT TCCTTCCTTT CTTTTATCTA CCAAACACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR

Pfam

PF00637--Clathrin

SMART

SM00299--CLH
SM00320--WD40

Gene Ontology

GO:0033263--C:CORVET complex
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0051020--F:GTPase binding
GO:0006623--P:protein targeting to vacuole
GO:0035542--P:regulation of SNARE complex assembly
GO:0042144--P:vacuole fusion, non-autophagic
GO:0016192--P:vesicle-mediated transport

KEGG

pop:POPTR_0009s00760g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008524	Aspergillus flavus	25.04	3.00e-44	174.00
IUUC-Afu-009054	Aspergillus fumigatus	25.08	3.00e-45	177.00
IUUC-Ani-009250	Aspergillus nidulans	24.60	1.00e-42	168.00
IUUC-Aor-010230	Aspergillus oryzae	25.32	5.00e-47	183.00
IUUC-Bci-013660	Botrytis cinerea	25.85	9.00e-43	168.00
IUUC-Cel-018385	Caenorhabditis elegans	25.83	5.00e-72	265.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	28.85	7.00e-40	158.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	25.04	6.00e-43	169.00
IUUC-Cne-026799	Cryptococcus neoformans	36.41	3.00e-170	592.00
IUUC-Cme-027200	Cyanidioschyzon merolae	32.52	2.00e-10	61.20
IUUC-Dme-031830	Drosophila melanogaster	31.70	2.00e-103	369.00
IUUC-Fox-037949	Fusarium oxysporum	24.44	2.00e-44	174.00
IUUC-Ggr-039733	Gaeumannomyces graminis	25.79	4.00e-48	186.00
IUUC-Lch-049444	Latimeria chalumnae	36.17	6.00e-155	540.00
IUUC-Lma-053173	Leptosphaeria maculans	24.25	3.00e-40	160.00
IUUC-Mpo-057312	Magnaporthe poae	25.73	3.00e-45	177.00
IUUC-Mla-058930	Melampsora laricipopulina	34.62	1.00e-37	149.00
IUUC-Mvi-060386	Microbotryum violaceum	37.96	5.00e-165	575.00
IUUC-Nfi-068436	Neosartorya fischeri	25.24	4.00e-48	186.00
IUUC-Ncr-068840	Neurospora crassa	26.86	2.00e-44	174.00
IUUC-Pno-095071	Phaeosphaeria nodorum	25.79	2.00e-45	178.00
IUUC-Pgr-103404	Puccinia graminis	32.51	1.00e-147	517.00
IUUC-Ptt-103952	Puccinia triticina	31.89	3.00e-142	499.00
IUUC-Pte-104216	Pyrenophora teres	24.36	9.00e-44	172.00
IUUC-Sre-115158	Sporisorium reilianum	36.05	3.00e-151	529.00
IUUC-Tre-121900	Trichoderma reesei	24.47	3.00e-43	170.00
IUUC-Tvi-122343	Trichoderma virens	23.91	1.00e-41	165.00
IUUC-Tme-127007	Tuber melanosporum	25.81	4.00e-47	183.00
IUUC-Uma-129356	Ustilago maydis	34.88	2.00e-150	526.00
IUUC-Vda-129676	Verticillium dahliae	24.92	4.00e-43	170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence