iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000078386.3	ENSDART00000160567.1	ENSDARP00000140613.1
ENSDARG00000078386.3	ENSDART00000161216.1	ENSDARP00000133144.1
ENSDARG00000078386.3	ENSDART00000164878.1	ENSDARP00000135779.1
ENSDARG00000078386.3	ENSDART00000007756.9	ENSDARP00000009095.9

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-16	61.0	322	353

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf....sdtllvsGsdDgtikvWDlrtg 33
            v + af    + +l+v G++ g+i +WD r++
   Q: 322  AVMSAAFakfhP-NLVVGGTYSGQIVLWDNRSN 353
           566777888654.8999999*********8876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSDKSELKAE LERKKQRLAQ IREEKKRKEE ERKKKEAELK KDAVPLQDDS DLEKKRREAD 60
ALLQSMGITS DVSAAPAPMS PTAKSVGSPS EAGSQDSGDG TTGPRTLHWD CDPSTVLLHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACCCGGAA ACTGAGCAGG GCAACAAAAG CAGCGCTTTC TGCAGGCAAC AAACAATCTC 60
AGGTCTGCTT ATAACATGCT TTTAAATAAG AGAAAACGTT TCAATAATGT GTCTATGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0007018--P:microtubule-based movement

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008245	Aspergillus clavatus	40.22	4.00e-91	329.00
IUUC-Afu-009032	Aspergillus fumigatus	39.74	3.00e-90	326.00
IUUC-Ame-011786	Astyanax mexicanus	89.58	0.00e+00	1069.00
IUUC-Cel-018207	Caenorhabditis elegans	44.52	6.00e-107	381.00
IUUC-Cne-026971	Cryptococcus neoformans	46.04	3.00e-115	409.00
IUUC-Dme-032157	Drosophila melanogaster	63.57	2.00e-169	589.00
IUUC-Loc-051856	Lepisosteus oculatus	83.69	0.00e+00	911.00
IUUC-Mpo-057521	Magnaporthe poae	39.57	3.00e-82	300.00
IUUC-Mla-058954	Melampsora laricipopulina	41.85	4.00e-106	378.00
IUUC-Mvi-060541	Microbotryum violaceum	43.23	1.00e-112	400.00
IUUC-Ncr-068656	Neurospora crassa	40.47	4.00e-104	372.00
IUUC-Pma-094729	Petromyzon marinus	71.36	0.00e+00	845.00
IUUC-Pfo-097067	Poecilia formosa	80.42	0.00e+00	905.00
IUUC-Pgr-103384	Puccinia graminis	42.04	2.00e-107	383.00
IUUC-Ptt-103792	Puccinia triticina	42.92	3.00e-109	389.00
IUUC-Spo-108374	Schizosaccharomyces pombe	31.57	1.00e-50	194.00
IUUC-Sre-114966	Sporisorium reilianum	43.31	1.00e-97	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence