iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028761

Ensembl Protein ID

ENSDARP00000060744.4

UniProt Accession

Q3B7P7; Q3B7P7_DANRE

Genbank Protein ID

AAI05747.1; AAI07518.1

Protein Name

Ubiquitin A-52 residue ribosomal protein fusion product 1

Genbank Nucleotide ID

CU693374; BC107517

Gene Name

uba52

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000041435.4	ENSDART00000060745.4	ENSDARP00000060744.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	3.80e-41	140.2	1	76
ULD/UDP/UBQ/UBQ_PIM	2.30e-29	102.0	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGIIEP SLRQLAQKYN CEKMICRKCY ARLHPRAVNC RKKKCGHTNN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCCGCC CGGACCAGCA GCTACTGCGA GGGTGAGGAT TTACTGTCCG AATTATTGTG 60
TCGTTTCACC GTATTCTCCT TCATTATTCA CTTCTGTGTT TTCACAAACA TCTACATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

dre:641289

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001006	Aegilops tauschii	58.28	5.00e-43	166.00
IUUC-Aml-001246	Ailuropoda melanoleuca	98.44	2.00e-71	260.00
IUUC-Atr-003081	Amborella trichopoda	72.09	8.00e-44	168.00
IUUC-Apl-004069	Anas platyrhynchos	96.39	4.00e-44	168.00
IUUC-Ath-007098	Arabidopsis thaliana	91.41	5.00e-66	242.00
IUUC-Ago-007932	Ashbya gossypii	91.41	7.00e-66	241.00
IUUC-Acl-008350	Aspergillus clavatus	85.71	2.00e-62	230.00
IUUC-Afl-008554	Aspergillus flavus	92.19	2.00e-66	244.00
IUUC-Afu-008984	Aspergillus fumigatus	90.62	9.00e-65	238.00
IUUC-Ang-009609	Aspergillus niger	91.41	2.00e-65	240.00
IUUC-Aor-009991	Aspergillus oryzae	90.55	4.00e-64	236.00
IUUC-Ate-010252	Aspergillus terreus	92.00	1.00e-64	240.00
IUUC-Ame-010785	Astyanax mexicanus	98.95	1.00e-52	197.00
IUUC-Bgr-012115	Blumeria graminis	91.20	8.00e-64	235.00
IUUC-Bta-013360	Bos taurus	98.44	2.00e-71	260.00
IUUC-Bci-013851	Botrytis cinerea	92.19	2.00e-66	243.00
IUUC-Bdi-014499	Brachypodium distachyon	92.19	1.00e-66	244.00
IUUC-Bol-015961	Brassica oleracea	91.41	5.00e-66	242.00
IUUC-Cel-018677	Caenorhabditis elegans	92.97	9.00e-66	241.00
IUUC-Cja-019572	Callithrix jacchus	98.44	2.00e-71	260.00
IUUC-Cfa-020339	Canis familiaris	98.44	2.00e-71	260.00
IUUC-Cpo-021534	Cavia porcellus	98.44	2.00e-71	260.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	92.97	2.00e-66	243.00
IUUC-Csa-023398	Chlorocebus sabaeus	98.44	2.00e-71	260.00
IUUC-Cin-025266	Ciona intestinalis	92.19	2.00e-66	243.00
IUUC-Csv-026105	Ciona savignyi	92.13	2.00e-66	243.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	90.40	2.00e-63	237.00
IUUC-Cne-026913	Cryptococcus neoformans	88.28	4.00e-64	236.00
IUUC-Cme-027344	Cyanidioschyzon merolae	93.41	6.00e-46	175.00
IUUC-Dno-028899	Dasypus novemcinctus	97.66	2.00e-70	256.00
IUUC-Dme-031588	Drosophila melanogaster	97.66	2.00e-70	256.00
IUUC-Ete-033120	Echinops telfairi	98.44	2.00e-71	260.00
IUUC-Eca-033787	Equus caballus	98.44	2.00e-71	260.00
IUUC-Fca-035725	Felis catus	98.44	2.00e-71	260.00
IUUC-Fox-037870	Fusarium oxysporum	90.62	1.00e-65	241.00
IUUC-Fso-038461	Fusarium solani	95.00	2.00e-40	156.00
IUUC-Gmo-039163	Gadus morhua	98.44	3.00e-71	259.00
IUUC-Ggr-040034	Gaeumannomyces graminis	90.62	8.00e-66	242.00
IUUC-Gga-040909	Gallus gallus	96.88	1.00e-70	257.00
IUUC-Gac-041640	Gasterosteus aculeatus	99.22	7.00e-72	261.00
IUUC-Gma-043254	Glycine max	91.41	1.00e-66	244.00
IUUC-Ggo-045411	Gorilla gorilla	98.44	2.00e-71	260.00
IUUC-Hsa-046609	Homo sapiens	78.26	5.00e-56	209.00
IUUC-Hvu-047579	Hordeum vulgare	69.85	7.00e-50	189.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	98.44	3.00e-72	264.00
IUUC-Kpa-049279	Komagataella pastoris	89.06	2.00e-64	237.00
IUUC-Lch-049971	Latimeria chalumnae	97.66	9.00e-71	259.00
IUUC-Lpe-051472	Leersia perrieri	79.70	2.00e-51	197.00
IUUC-Loc-052117	Lepisosteus oculatus	99.22	4.00e-72	263.00
IUUC-Lma-053049	Leptosphaeria maculans	92.97	7.00e-67	245.00
IUUC-Laf-054284	Loxodonta africana	98.44	3.00e-72	264.00
IUUC-Mcc-055710	Macaca mulatta	96.92	1.00e-70	259.00
IUUC-Meu-056411	Macropus eugenii	98.44	2.00e-71	260.00
IUUC-Mor-057008	Magnaporthe oryzae	89.06	2.00e-64	237.00
IUUC-Mpo-057360	Magnaporthe poae	90.62	9.00e-66	241.00
IUUC-Mtr-058437	Medicago truncatula	90.62	3.00e-65	239.00
IUUC-Mla-059080	Melampsora laricipopulina	88.35	1.00e-49	187.00
IUUC-Mmr-061335	Microcebus murinus	92.19	1.00e-64	238.00
IUUC-Mdo-062752	Monodelphis domestica	98.44	2.00e-71	260.00
IUUC-Mmu-063548	Mus musculus	98.44	3.00e-72	264.00
IUUC-Mac-064915	Musa acuminata	92.19	2.00e-66	243.00
IUUC-Mpu-066513	Mustela putorius furo	98.44	2.00e-71	260.00
IUUC-Mlu-068010	Myotis lucifugus	96.09	6.00e-70	255.00
IUUC-Nfi-068358	Neosartorya fischeri	92.06	1.00e-64	238.00
IUUC-Ncr-068799	Neurospora crassa	90.62	3.00e-65	240.00
IUUC-Opr-070655	Ochotona princeps	98.44	2.00e-71	260.00
IUUC-Ont-072180	Oreochromis niloticus	99.21	1.00e-70	258.00
IUUC-Oan-073196	Ornithorhynchus anatinus	98.44	2.00e-71	260.00
IUUC-Oba-075092	Oryza barthii	91.41	3.00e-66	243.00
IUUC-Obr-076156	Oryza brachyantha	91.41	3.00e-66	243.00
IUUC-Ogl-077471	Oryza glaberrima	91.41	3.00e-66	243.00
IUUC-Ogu-078259	Oryza glumaepatula	91.41	3.00e-66	243.00
IUUC-Oin-079901	Oryza indica	91.41	3.00e-66	243.00
IUUC-Ome-081343	Oryza meridionalis	91.41	3.00e-66	243.00
IUUC-Oni-082301	Oryza nivara	81.19	4.00e-33	134.00
IUUC-Opu-083839	Oryza punctata	65.67	2.00e-36	147.00
IUUC-Oru-085252	Oryza rufipogon	91.41	3.00e-66	243.00
IUUC-Osa-085747	Oryza sativa	79.10	1.00e-50	191.00
IUUC-Ola-086333	Oryzias latipes	97.66	2.00e-70	257.00
IUUC-Olu-087819	Ostreococcus lucimarinus	82.81	4.00e-59	219.00
IUUC-Oga-088027	Otolemur garnettii	98.44	2.00e-71	260.00
IUUC-Oar-090419	Ovis aries	98.44	2.00e-71	260.00
IUUC-Ptr-091593	Pan troglodytes	98.44	2.00e-71	260.00
IUUC-Pan-091806	Papio anubis	95.31	2.00e-67	247.00
IUUC-Psi-093654	Pelodiscus sinensis	98.44	2.00e-71	260.00
IUUC-Ppa-095174	Physcomitrella patens	91.41	8.00e-66	241.00
IUUC-Pfo-096492	Poecilia formosa	99.22	8.00e-72	261.00
IUUC-Pab-098004	Pongo abelii	98.44	2.00e-71	260.00
IUUC-Pop-098929	Populus trichocarpa	92.19	2.00e-66	243.00
IUUC-Ppe-101497	Prunus persica	91.41	6.00e-66	242.00
IUUC-Pva-102945	Pteropus vampyrus	98.44	2.00e-71	260.00
IUUC-Pgr-103268	Puccinia graminis	88.28	9.00e-65	239.00
IUUC-Ptt-103804	Puccinia triticina	91.09	9.00e-52	195.00
IUUC-Pte-104101	Pyrenophora teres	92.19	2.00e-66	244.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	92.19	6.00e-66	242.00
IUUC-Rno-105290	Rattus norvegicus	98.44	2.00e-71	260.00
IUUC-Sce-106249	Saccharomyces cerevisiae	89.84	4.00e-65	239.00
IUUC-Sha-106570	Sarcophilus harrisii	98.44	2.00e-71	260.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	92.97	1.00e-66	244.00
IUUC-Spo-108045	Schizosaccharomyces pombe	92.19	5.00e-66	242.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	92.97	1.00e-66	244.00
IUUC-Sit-110085	Setaria italica	88.89	9.00e-65	239.00
IUUC-Sly-111884	Solanum lycopersicum	92.19	2.00e-66	243.00
IUUC-Stu-112385	Solanum tuberosum	91.74	2.00e-62	230.00
IUUC-Sar-112942	Sorex araneus	99.22	7.00e-72	261.00
IUUC-Sbi-114790	Sorghum bicolor	90.62	1.00e-65	241.00
IUUC-Sre-114908	Sporisorium reilianum	89.84	3.00e-64	236.00
IUUC-Ssc-116417	Sus scrofa	98.44	2.00e-71	260.00
IUUC-Tru-117557	Takifugu rubripes	98.44	3.00e-71	259.00
IUUC-Tni-119715	Tetraodon nigroviridis	98.44	3.00e-71	259.00
IUUC-Tca-121404	Theobroma cacao	91.41	5.00e-66	243.00
IUUC-Tvi-122611	Trichoderma virens	89.84	3.00e-65	240.00
IUUC-Tae-123019	Triticum aestivum	75.16	1.00e-61	228.00
IUUC-Tur-126527	Triticum urartu	92.19	1.00e-66	244.00
IUUC-Tme-127138	Tuber melanosporum	92.80	2.00e-65	241.00
IUUC-Ttr-128939	Tursiops truncatus	98.44	2.00e-71	260.00
IUUC-Uma-129619	Ustilago maydis	89.84	3.00e-64	236.00
IUUC-Vda-129775	Verticillium dahliae	88.89	3.00e-63	233.00
IUUC-Vvi-130859	Vitis vinifera	92.19	1.00e-66	244.00
IUUC-Xtr-131921	Xenopus tropicalis	98.44	2.00e-71	260.00
IUUC-Xma-134071	Xiphophorus maculatus	99.22	8.00e-72	261.00
IUUC-Yli-134671	Yarrowia lipolytica	92.19	5.00e-66	242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence