iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098812

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_816638; POPTR_0002s17400g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s17400	POPTR_0002s17400.1	POPTR_0002s17400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-12	46.3	2338	2373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H +svt ++  +   l+++Gs Dg ik+WD +  +l
   Q: 2338 HLGSVTKISTiPHtSLFLTGSKDGDIKLWDAKAAKL 2373
           9999***996655589**************766665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPETSTASPT RASINPTDHL PLSLFRSDII PPAPTRSAST IDWLPDFSGY SWVAYGASSL 60
LVISHLPSPL SPEEAAIGPI LQQVFELSSD DSSPVKSVSW SPVTPSIGEL AAASDNCISV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTGTCTCT CACTAACTCT CTCCTCGCAT CACAGGCGAA ACCAAAATGC CCGAAACAAG 60
CACTGCCTCT CCTACTCGAG CCTCAATTAA CCCCACCGAC CACCTCCCTC TCTCTCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

KEGG

pop:POPTR_0002s17400g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	58.05	2.00e-52	197.00
IUUC-Aml-001368	Ailuropoda melanoleuca	31.80	2.00e-34	142.00
IUUC-Atr-002754	Amborella trichopoda	56.43	0.00e+00	643.00
IUUC-Apl-003377	Anas platyrhynchos	32.19	9.00e-34	140.00
IUUC-Aca-004649	Anolis carolinensis	31.23	2.00e-36	149.00
IUUC-Aly-006404	Arabidopsis lyrata	52.34	0.00e+00	1377.00
IUUC-Ath-006612	Arabidopsis thaliana	48.99	0.00e+00	2095.00
IUUC-Afu-009077	Aspergillus fumigatus	27.19	1.00e-34	142.00
IUUC-Ani-009437	Aspergillus nidulans	25.18	8.00e-37	149.00
IUUC-Ang-009742	Aspergillus niger	28.61	7.00e-37	149.00
IUUC-Ame-010919	Astyanax mexicanus	27.40	8.00e-36	147.00
IUUC-Bta-013088	Bos taurus	31.69	2.00e-34	142.00
IUUC-Bdi-014471	Brachypodium distachyon	45.13	2.00e-171	595.00
IUUC-Bol-016375	Brassica oleracea	49.03	0.00e+00	2081.00
IUUC-Bra-016630	Brassica rapa	49.11	0.00e+00	2135.00
IUUC-Cel-018537	Caenorhabditis elegans	37.65	1.00e-24	110.00
IUUC-Cja-019137	Callithrix jacchus	36.45	2.00e-33	139.00
IUUC-Cfa-021215	Canis familiaris	30.63	5.00e-34	140.00
IUUC-Cpo-022333	Cavia porcellus	31.93	2.00e-34	142.00
IUUC-Csa-023151	Chlorocebus sabaeus	31.69	3.00e-33	138.00
IUUC-Cho-024762	Choloepus hoffmanni	30.17	4.00e-33	138.00
IUUC-Csv-026055	Ciona savignyi	39.13	1.00e-38	156.00
IUUC-Dre-028673	Danio rerio	33.05	2.00e-34	142.00
IUUC-Dno-029855	Dasypus novemcinctus	31.80	9.00e-27	117.00
IUUC-Dor-030381	Dipodomys ordii	35.61	3.00e-33	138.00
IUUC-Dme-031825	Drosophila melanogaster	35.14	4.00e-40	161.00
IUUC-Ete-033176	Echinops telfairi	33.05	1.00e-32	136.00
IUUC-Eca-033386	Equus caballus	30.17	3.00e-33	138.00
IUUC-Eeu-035011	Erinaceus europaeus	32.92	2.00e-33	139.00
IUUC-Fca-035735	Felis catus	32.98	3.00e-35	145.00
IUUC-Fal-037367	Ficedula albicollis	31.65	2.00e-35	145.00
IUUC-Gmo-038687	Gadus morhua	26.53	2.00e-34	142.00
IUUC-Gga-040693	Gallus gallus	31.76	2.00e-34	142.00
IUUC-Gac-041986	Gasterosteus aculeatus	30.25	5.00e-34	141.00
IUUC-Gma-044099	Glycine max	54.23	0.00e+00	1555.00
IUUC-Ggo-044811	Gorilla gorilla	36.10	2.00e-33	139.00
IUUC-Hsa-045950	Homo sapiens	36.10	2.00e-33	139.00
IUUC-Hvu-047213	Hordeum vulgare	67.79	6.00e-121	426.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	29.83	3.00e-33	138.00
IUUC-Lch-050020	Latimeria chalumnae	33.10	2.00e-34	142.00
IUUC-Lpe-051382	Leersia perrieri	39.67	0.00e+00	1296.00
IUUC-Loc-052909	Lepisosteus oculatus	31.42	9.00e-36	147.00
IUUC-Laf-054195	Loxodonta africana	36.59	3.00e-34	142.00
IUUC-Mcc-055646	Macaca mulatta	36.10	2.00e-33	139.00
IUUC-Meu-056627	Macropus eugenii	27.15	2.00e-21	99.40
IUUC-Mtr-058725	Medicago truncatula	53.17	0.00e+00	2503.00
IUUC-Mga-059386	Meleagris gallopavo	32.77	2.00e-33	139.00
IUUC-Mmr-060784	Microcebus murinus	36.59	5.00e-34	141.00
IUUC-Mdo-062914	Monodelphis domestica	32.28	3.00e-34	141.00
IUUC-Mmu-063808	Mus musculus	30.35	3.00e-35	145.00
IUUC-Mac-065224	Musa acuminata	45.88	0.00e+00	1918.00
IUUC-Mpu-066054	Mustela putorius furo	29.83	4.00e-33	138.00
IUUC-Mlu-067458	Myotis lucifugus	37.38	1.00e-33	139.00
IUUC-Nfi-068420	Neosartorya fischeri	27.04	1.00e-33	139.00
IUUC-Nle-070123	Nomascus leucogenys	36.10	2.00e-33	139.00
IUUC-Opr-070543	Ochotona princeps	24.44	3.00e-17	85.50
IUUC-Ont-071658	Oreochromis niloticus	30.90	4.00e-36	148.00
IUUC-Ocu-074048	Oryctolagus cuniculus	29.56	1.00e-34	142.00
IUUC-Oba-075826	Oryza barthii	39.49	0.00e+00	1578.00
IUUC-Obr-076145	Oryza brachyantha	39.45	0.00e+00	1551.00
IUUC-Ogu-078307	Oryza glumaepatula	39.73	0.00e+00	1598.00
IUUC-Oin-080118	Oryza indica	39.51	0.00e+00	969.00
IUUC-Olo-080848	Oryza longistaminata	42.80	5.00e-175	608.00
IUUC-Oni-082792	Oryza nivara	41.06	0.00e+00	1239.00
IUUC-Opu-084153	Oryza punctata	39.85	0.00e+00	1277.00
IUUC-Oru-084415	Oryza rufipogon	40.65	0.00e+00	1211.00
IUUC-Osa-085332	Oryza sativa	51.52	4.00e-174	604.00
IUUC-Ola-087560	Oryzias latipes	32.88	1.00e-32	136.00
IUUC-Oga-088816	Otolemur garnettii	32.04	3.00e-35	145.00
IUUC-Oar-089618	Ovis aries	30.63	2.00e-34	142.00
IUUC-Ptr-090937	Pan troglodytes	36.10	2.00e-33	139.00
IUUC-Pan-092151	Papio anubis	32.04	1.00e-33	140.00
IUUC-Psi-093590	Pelodiscus sinensis	31.76	7.00e-36	147.00
IUUC-Ppa-095505	Physcomitrella patens	28.20	1.00e-178	621.00
IUUC-Pfo-097445	Poecilia formosa	29.54	2.00e-36	149.00
IUUC-Pab-098237	Pongo abelii	36.10	2.00e-33	139.00
IUUC-Pca-101008	Procavia capensis	36.95	1.00e-33	140.00
IUUC-Ppe-101610	Prunus persica	60.58	0.00e+00	1773.00
IUUC-Pva-102348	Pteropus vampyrus	36.10	2.00e-33	139.00
IUUC-Rno-105076	Rattus norvegicus	30.50	1.00e-35	146.00
IUUC-Sha-106860	Sarcophilus harrisii	32.63	4.00e-35	144.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	22.70	2.00e-25	111.00
IUUC-Smo-109573	Selaginella moellendorffii	47.28	1.00e-119	422.00
IUUC-Sit-109981	Setaria italica	41.96	0.00e+00	815.00
IUUC-Sly-110968	Solanum lycopersicum	50.61	0.00e+00	1421.00
IUUC-Stu-111939	Solanum tuberosum	74.58	3.00e-77	280.00
IUUC-Sar-113751	Sorex araneus	30.73	3.00e-21	99.00
IUUC-Sbi-113768	Sorghum bicolor	64.41	4.00e-66	243.00
IUUC-Ssc-116371	Sus scrofa	29.70	1.00e-34	143.00
IUUC-Tgu-117108	Taeniopygia guttata	30.70	1.00e-33	139.00
IUUC-Tru-117628	Takifugu rubripes	30.93	4.00e-34	141.00
IUUC-Tsy-119228	Tarsius syrichta	31.66	3.00e-33	138.00
IUUC-Tni-120709	Tetraodon nigroviridis	31.76	4.00e-36	148.00
IUUC-Tca-121789	Theobroma cacao	62.13	0.00e+00	1792.00
IUUC-Tae-125726	Triticum aestivum	39.48	0.00e+00	1527.00
IUUC-Tur-126437	Triticum urartu	43.28	8.00e-65	241.00
IUUC-Tbe-127760	Tupaia belangeri	29.83	8.00e-34	140.00
IUUC-Ttr-128991	Tursiops truncatus	31.21	2.00e-34	142.00
IUUC-Vpa-130309	Vicugna pacos	30.99	6.00e-34	140.00
IUUC-Vvi-131584	Vitis vinifera	58.32	0.00e+00	1033.00
IUUC-Xtr-132638	Xenopus tropicalis	33.19	5.00e-34	141.00
IUUC-Xma-134109	Xiphophorus maculatus	30.34	8.00e-35	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence