iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058676

Ensembl Protein ID

KEH21140

UniProt Accession

A0A072U5K6; A0A072U5K6_MEDTR

Genbank Protein ID

KEH21140.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g098950

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g098950	KEH21141	KEH21141
MTR_8g098950	KEH21140	KEH21140
MTR_8g098950	KEH21142	KEH21142

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-10	40.4	551	598

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.........sdtl...lvsGsdDgtikvWDlrtgvllk 37
           gHt+sv cla           + +   lvsGs D+ti++WDl++g l+k
   Q: 551  GHTGSVLCLAVhqmmcsaksRT-FkrvLVSGSMDCTIRIWDLDSGSLIK 598
           8********9999999887533.24459***************998865 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MKCRSVACIW SGTPFPSAHK VTAVAAFTQP PSPAAFYTAG SDGSIIWWSL STSASTSSPQ 60
VKAVGVLCGH ASPITDLALC SPITAEENDH VSSKTNFSAL ISACCDGFLC VWSKSSGHCR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTGCA GATCCGTTGC GTGCATATGG TCAGGCACAC CTTTCCCTTC CGCTCACAAA 60
GTAACCGCCG TCGCCGCTTT CACCCAACCA CCGTCACCTG CCGCCTTTTA CACCGCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

KEGG

mtr:MTR_8g098950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	36.80	2.00e-128	452.00
IUUC-Aml-001481	Ailuropoda melanoleuca	22.25	1.00e-13	72.40
IUUC-Atr-002981	Amborella trichopoda	47.17	0.00e+00	1195.00
IUUC-Apl-003943	Anas platyrhynchos	22.49	1.00e-14	75.10
IUUC-Aca-005145	Anolis carolinensis	22.46	2.00e-13	71.60
IUUC-Aly-005882	Arabidopsis lyrata	52.55	0.00e+00	1367.00
IUUC-Ath-006797	Arabidopsis thaliana	52.98	0.00e+00	1367.00
IUUC-Ame-011180	Astyanax mexicanus	25.91	2.00e-12	68.60
IUUC-Bta-012912	Bos taurus	22.41	5.00e-14	73.60
IUUC-Bol-016538	Brassica oleracea	52.31	0.00e+00	1310.00
IUUC-Bra-018098	Brassica rapa	47.56	0.00e+00	766.00
IUUC-Cel-018565	Caenorhabditis elegans	19.53	4.00e-09	57.40
IUUC-Cja-019970	Callithrix jacchus	22.25	9.00e-14	72.80
IUUC-Cfa-020677	Canis familiaris	22.25	1.00e-13	72.40
IUUC-Cpo-021408	Cavia porcellus	22.00	4.00e-13	70.50
IUUC-Csa-023786	Chlorocebus sabaeus	22.25	8.00e-14	72.80
IUUC-Cho-024612	Choloepus hoffmanni	22.25	9.00e-14	72.80
IUUC-Cin-025255	Ciona intestinalis	26.88	2.00e-11	64.70
IUUC-Csv-026361	Ciona savignyi	27.33	1.00e-11	65.90
IUUC-Cne-026981	Cryptococcus neoformans	21.26	6.00e-11	63.20
IUUC-Dre-027951	Danio rerio	29.93	4.00e-10	59.30
IUUC-Dno-029072	Dasypus novemcinctus	22.25	1.00e-13	72.80
IUUC-Dor-030771	Dipodomys ordii	28.77	8.00e-10	59.70
IUUC-Dme-031768	Drosophila melanogaster	30.59	7.00e-14	73.20
IUUC-Ete-032492	Echinops telfairi	21.76	2.00e-12	68.20
IUUC-Eca-033496	Equus caballus	22.25	1.00e-13	72.40
IUUC-Fca-035530	Felis catus	22.25	1.00e-13	72.00
IUUC-Fal-037238	Ficedula albicollis	26.15	5.00e-13	70.10
IUUC-Gmo-039528	Gadus morhua	28.22	7.00e-12	66.20
IUUC-Gga-041043	Gallus gallus	22.20	3.00e-16	80.90
IUUC-Gac-042524	Gasterosteus aculeatus	27.32	7.00e-12	66.20
IUUC-Gma-043201	Glycine max	77.05	0.00e+00	2206.00
IUUC-Ggo-045112	Gorilla gorilla	22.25	1.00e-13	72.40
IUUC-Hsa-046732	Homo sapiens	22.25	1.00e-13	72.40
IUUC-Itr-048340	Ictidomys tridecemlineatus	26.37	4.00e-13	68.90
IUUC-Lch-050643	Latimeria chalumnae	24.25	2.00e-12	68.20
IUUC-Lpe-051544	Leersia perrieri	45.68	0.00e+00	1061.00
IUUC-Loc-051774	Lepisosteus oculatus	23.25	2.00e-12	68.20
IUUC-Laf-054349	Loxodonta africana	22.00	2.00e-13	71.60
IUUC-Mcc-055800	Macaca mulatta	22.25	1.00e-13	72.40
IUUC-Meu-056091	Macropus eugenii	20.53	3.00e-09	57.40
IUUC-Mmr-061271	Microcebus murinus	22.25	1.00e-13	72.40
IUUC-Mdo-062622	Monodelphis domestica	21.90	1.00e-13	72.40
IUUC-Mmu-063262	Mus musculus	22.00	9.00e-13	69.30
IUUC-Mac-065659	Musa acuminata	48.10	0.00e+00	1109.00
IUUC-Mpu-066523	Mustela putorius furo	26.02	5.00e-14	73.60
IUUC-Mlu-067288	Myotis lucifugus	22.49	6.00e-14	73.20
IUUC-Nle-069610	Nomascus leucogenys	22.25	8.00e-14	72.80
IUUC-Opr-070413	Ochotona princeps	22.16	9.00e-11	62.80
IUUC-Ont-072199	Oreochromis niloticus	26.78	4.00e-11	63.90
IUUC-Oan-073095	Ornithorhynchus anatinus	22.49	6.00e-14	73.20
IUUC-Ocu-074257	Oryctolagus cuniculus	21.00	1.00e-13	72.00
IUUC-Oba-075713	Oryza barthii	46.26	0.00e+00	1052.00
IUUC-Obr-076894	Oryza brachyantha	45.05	0.00e+00	1036.00
IUUC-Ogl-077521	Oryza glaberrima	46.61	0.00e+00	1063.00
IUUC-Ogu-078103	Oryza glumaepatula	45.09	0.00e+00	1042.00
IUUC-Oin-080169	Oryza indica	46.54	0.00e+00	1066.00
IUUC-Olo-080818	Oryza longistaminata	56.56	1.00e-160	560.00
IUUC-Ome-081902	Oryza meridionalis	46.53	0.00e+00	1078.00
IUUC-Oni-082333	Oryza nivara	46.54	0.00e+00	1063.00
IUUC-Opu-083952	Oryza punctata	46.94	0.00e+00	1043.00
IUUC-Oru-085112	Oryza rufipogon	46.26	0.00e+00	1053.00
IUUC-Osa-085615	Oryza sativa	43.05	1.00e-139	489.00
IUUC-Ola-087177	Oryzias latipes	27.78	2.00e-11	65.10
IUUC-Olu-087828	Ostreococcus lucimarinus	30.39	3.00e-19	90.10
IUUC-Oga-088290	Otolemur garnettii	22.07	2.00e-14	74.70
IUUC-Oar-089575	Ovis aries	22.22	1.00e-13	72.40
IUUC-Ptr-091041	Pan troglodytes	22.25	1.00e-13	72.40
IUUC-Pan-092048	Papio anubis	22.25	1.00e-13	72.40
IUUC-Psi-093637	Pelodiscus sinensis	21.98	2.00e-14	74.70
IUUC-Pma-094117	Petromyzon marinus	31.47	3.00e-09	56.60
IUUC-Pfo-096529	Poecilia formosa	22.57	6.00e-12	66.60
IUUC-Pab-098194	Pongo abelii	22.25	1.00e-13	72.40
IUUC-Pop-099546	Populus trichocarpa	57.21	0.00e+00	1630.00
IUUC-Ppe-101653	Prunus persica	59.44	0.00e+00	1719.00
IUUC-Pva-102803	Pteropus vampyrus	21.76	5.00e-13	70.50
IUUC-Rno-105904	Rattus norvegicus	21.75	6.00e-12	66.60
IUUC-Sha-106926	Sarcophilus harrisii	21.90	8.00e-14	72.40
IUUC-Smo-109304	Selaginella moellendorffii	35.75	8.00e-139	487.00
IUUC-Sit-110049	Setaria italica	36.85	2.00e-142	499.00
IUUC-Sly-111516	Solanum lycopersicum	49.21	0.00e+00	1280.00
IUUC-Stu-111982	Solanum tuberosum	49.77	0.00e+00	1360.00
IUUC-Sar-113730	Sorex araneus	23.18	4.00e-14	73.90
IUUC-Sbi-114887	Sorghum bicolor	43.87	2.00e-97	349.00
IUUC-Ssc-116213	Sus scrofa	22.28	4.00e-14	73.20
IUUC-Tgu-117297	Taeniopygia guttata	22.17	1.00e-14	75.90
IUUC-Tru-117887	Takifugu rubripes	27.81	1.00e-11	65.90
IUUC-Tsy-118970	Tarsius syrichta	22.25	2.00e-13	71.20
IUUC-Tni-119791	Tetraodon nigroviridis	26.78	2.00e-11	63.90
IUUC-Tca-121391	Theobroma cacao	55.50	0.00e+00	1515.00
IUUC-Tae-123628	Triticum aestivum	45.73	0.00e+00	1078.00
IUUC-Tur-125959	Triticum urartu	38.68	3.00e-140	492.00
IUUC-Tbe-127847	Tupaia belangeri	28.77	8.00e-10	59.70
IUUC-Ttr-128200	Tursiops truncatus	25.28	1.00e-12	68.90
IUUC-Vpa-130178	Vicugna pacos	22.36	7.00e-14	73.20
IUUC-Xtr-132699	Xenopus tropicalis	21.81	2.00e-13	71.20
IUUC-Xma-133180	Xiphophorus maculatus	27.61	2.00e-11	63.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence