iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098568

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01258761

Gene Name

USP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000001284.2	ENSPPYT00000001545.2	ENSPPYP00000001497.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.90e-87	291.5	81	784

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle......kkkeklneenpkepkg..........ellkslqklfeel.......w..... 61
           +Gl+NlgNtCY+NS+LQ+L+++p +++ +++      +kke+l++e+++++kg          el++slq+l+ ++       +     
   Q: 81   VGLNNLGNTCYLNSILQVLYFCPGFKSGVKHlfniisRKKEALKDEANQKDKGnckedslasyELICSLQSLIISVeqlqasfLlnpek 169
           6************************************999999999999999999999*****99999999999995555555144555 PP
   S: 62   kskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkk.................eknkpkeeeeeedkselsde.... 129
           ++++ a++pr+ll++l++++++++gy q+DaqE+l+++l +++e+++                  e  +pkee+++ ++ e++++    
   Q: 170  YTDELATQPRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLlkkeevknvaelptkveEIPHPKEEMSGINSMEMDSMrhse 258
           88888*****************************************556667788888888888777788888888887777777**** PP
   S: 130  ......................................................................................... 129
                                                                                                    
   Q: 259  dfkeklpkgngkrksdtefgnmkkkvkvskehqsleenqrqtrskrkatsdtlesppkiipkyisenesprpsqkksrvkinwlksatk 347
           ***************************************************************************************** PP
   S: 130  .............................................................aeekkkkknk.....slisdlFqgqlks 152
                                                                        +e k+ +k++     +l+++lFqgql  
   Q: 348  qpsilskfcslgkittnqgakgqskeneydpeedlgkcendnttngcglespgntvtpvnvNEVKPINKGEeqigfELVEKLFQGQLVL 436
           ***********************************************************99555555555556666************* PP
   S: 153  qikclecdnvssreepfldlslpvpgkeetkke..............slqdcLesftkeeelegenkyycekckkkqeaekklklkklP 227
           +++clec++ ++r+e+f+d+s+pv+++e +k e              +l++++++f++ e++ ge+ky+ce+c++++eae++l ++k+P
   Q: 437  RTRCLECESLTERREDFQDISVPVQEDELSKVEesseispepktemkTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMP 525
           ****************************99998******************************************************** PP
   S: 228  evLilhLkRf.....sfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvkn......... 301
           ev+++hLk+f     +f+++++  +kin+ + +pl+L+l+++ t+p+     +++Y L+avv+HsG ++ssGHY+a vk          
   Q: 526  EVITIHLKCFaasglEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPT-----NDSYGLFAVVMHSGiTISSGHYTASVKVtdlnsleld 609
           *********************************************99.....678********************************** PP
   S: 302  ......................................................................................... 301
                                                                                                    
   Q: 610  kgnfvvdqmceigkpeplneeeargvvenyndeevsirvggntqpskvlnkknveaigllggqkskadyelynkasnpdkvastafaen 698
           ***************************************************************************************** PP
   S: 302  ............................................ekgkWllfdDskVtevkeeevleetg......staYvlfYkr 337
                                                        +gkWllfdDs+V++++e+++l++ +      st+Y+lfYk+
   Q: 699  rnsetndtngthesdrnkessdqtginisgfenkisyvvqslkeYEGKWLLFDDSEVKVTEEKDFLNSLSpstsptSTPYLLFYKK 784
           ********9999999999999999999999988888888877766999*******************888**************97 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MPGVIPSESN GLSRGSPSKK NRLSLKFFQK KETKRALDFT DSQENEEKAS EYRASEIDQV 60
VPAAQSSPIN CEKRENLLPF VGLNNLGNTC YLNSILQVLY FCPGFKSGVK HLFNIISRKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAAGCCGC ACCCTCCGCG GCGTCCCACC GTCGAGGATT AACAAAACGC CAAACAAGAT 60
TTTAACAGTC GGCAGCGAAA GCGCGCACTC GAGCGCCAAT GAGAGCGGAA GGAGGGGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR033815--USP1
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0004197--F:cysteine-type endopeptidase activity
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0035520--P:monoubiquitinated protein deubiquitination
GO:0006282--P:regulation of DNA repair
GO:0009411--P:response to UV
GO:0001501--P:skeletal system development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pon:100443075

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001939	Ailuropoda melanoleuca	94.53	0.00e+00	1440.00
IUUC-Apl-004204	Anas platyrhynchos	73.01	0.00e+00	938.00
IUUC-Aca-004637	Anolis carolinensis	65.50	0.00e+00	932.00
IUUC-Ame-011718	Astyanax mexicanus	48.08	3.00e-173	602.00
IUUC-Bta-012552	Bos taurus	92.61	0.00e+00	1415.00
IUUC-Cja-019588	Callithrix jacchus	97.71	0.00e+00	1527.00
IUUC-Cfa-020211	Canis familiaris	95.03	0.00e+00	1454.00
IUUC-Cpo-021551	Cavia porcellus	84.59	0.00e+00	1275.00
IUUC-Csa-024186	Chlorocebus sabaeus	98.22	0.00e+00	1540.00
IUUC-Cho-024739	Choloepus hoffmanni	83.84	0.00e+00	758.00
IUUC-Dre-028184	Danio rerio	49.70	3.00e-177	615.00
IUUC-Dno-029669	Dasypus novemcinctus	91.12	0.00e+00	1409.00
IUUC-Dor-030168	Dipodomys ordii	86.93	0.00e+00	1263.00
IUUC-Dme-031732	Drosophila melanogaster	28.77	4.00e-18	87.00
IUUC-Ete-032825	Echinops telfairi	87.33	0.00e+00	965.00
IUUC-Eca-033595	Equus caballus	94.51	0.00e+00	1365.00
IUUC-Eeu-034877	Erinaceus europaeus	80.78	5.00e-162	564.00
IUUC-Fca-035381	Felis catus	94.27	0.00e+00	1021.00
IUUC-Fal-037592	Ficedula albicollis	69.12	0.00e+00	962.00
IUUC-Gmo-039680	Gadus morhua	44.72	4.00e-152	531.00
IUUC-Gga-041196	Gallus gallus	72.48	0.00e+00	1063.00
IUUC-Gac-042292	Gasterosteus aculeatus	57.56	7.00e-83	301.00
IUUC-Ggo-044671	Gorilla gorilla	99.24	0.00e+00	1563.00
IUUC-Hsa-047020	Homo sapiens	98.98	0.00e+00	1556.00
IUUC-Itr-048800	Ictidomys tridecemlineatus	85.88	0.00e+00	1278.00
IUUC-Lch-050543	Latimeria chalumnae	58.16	0.00e+00	708.00
IUUC-Loc-052338	Lepisosteus oculatus	52.96	0.00e+00	706.00
IUUC-Laf-053707	Loxodonta africana	91.25	0.00e+00	1422.00
IUUC-Mcc-055885	Macaca mulatta	98.47	0.00e+00	1543.00
IUUC-Meu-056573	Macropus eugenii	67.09	0.00e+00	953.00
IUUC-Mga-059346	Meleagris gallopavo	72.86	0.00e+00	1008.00
IUUC-Mmr-061612	Microcebus murinus	94.39	0.00e+00	1415.00
IUUC-Mdo-062887	Monodelphis domestica	73.73	0.00e+00	1059.00
IUUC-Mmu-064044	Mus musculus	88.30	0.00e+00	1368.00
IUUC-Mpu-066847	Mustela putorius furo	95.41	0.00e+00	1457.00
IUUC-Mlu-067684	Myotis lucifugus	91.99	0.00e+00	1435.00
IUUC-Nle-070057	Nomascus leucogenys	99.11	0.00e+00	1561.00
IUUC-Opr-070463	Ochotona princeps	84.44	0.00e+00	1259.00
IUUC-Ont-071975	Oreochromis niloticus	51.27	1.00e-142	500.00
IUUC-Oan-073062	Ornithorhynchus anatinus	85.71	9.00e-47	178.00
IUUC-Ocu-074840	Oryctolagus cuniculus	93.76	0.00e+00	1440.00
IUUC-Ola-087088	Oryzias latipes	46.63	6.00e-174	604.00
IUUC-Oga-088472	Otolemur garnettii	93.63	0.00e+00	1439.00
IUUC-Oar-089498	Ovis aries	92.87	0.00e+00	1421.00
IUUC-Ptr-091395	Pan troglodytes	99.36	0.00e+00	1561.00
IUUC-Pan-092462	Papio anubis	98.60	0.00e+00	1543.00
IUUC-Psi-093583	Pelodiscus sinensis	72.38	0.00e+00	919.00
IUUC-Pma-094644	Petromyzon marinus	36.78	1.00e-28	119.00
IUUC-Pfo-096314	Poecilia formosa	46.45	1.00e-168	587.00
IUUC-Pca-100948	Procavia capensis	82.21	0.00e+00	1252.00
IUUC-Pva-102853	Pteropus vampyrus	93.75	0.00e+00	1444.00
IUUC-Rno-105573	Rattus norvegicus	88.79	0.00e+00	1359.00
IUUC-Sha-107495	Sarcophilus harrisii	72.16	0.00e+00	892.00
IUUC-Sar-113545	Sorex araneus	77.81	0.00e+00	1112.00
IUUC-Ssc-115962	Sus scrofa	94.68	0.00e+00	1472.00
IUUC-Tgu-116731	Taeniopygia guttata	69.43	0.00e+00	978.00
IUUC-Tru-117893	Takifugu rubripes	46.67	1.00e-158	553.00
IUUC-Tsy-119644	Tarsius syrichta	84.95	0.00e+00	1266.00
IUUC-Tni-119819	Tetraodon nigroviridis	45.15	3.00e-169	588.00
IUUC-Tbe-127272	Tupaia belangeri	89.16	0.00e+00	1266.00
IUUC-Ttr-128404	Tursiops truncatus	94.39	0.00e+00	1462.00
IUUC-Vpa-130205	Vicugna pacos	93.75	0.00e+00	1450.00
IUUC-Xtr-132613	Xenopus tropicalis	56.18	0.00e+00	745.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence