iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000001279.1	ENSSHAT00000001452.1	ENSSHAP00000001436.1
ENSSHAG00000001279.1	ENSSHAT00000001453.1	ENSSHAP00000001437.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	44.65	8.00e-122	433.00	IUUC-Sce-106399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MSLFNLDRFR FEKRNKIQEQ PEPAPQLPPP PTPLPSQVEP PSPVSTIIED DDLEGGKGSR 60
PGTPDSDITE KTEDSSVPET PEPERKSGVS YFKNQKGIQF IDLSSDSEDF GSPNCSNINQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTATCCGGG CCAGCTCCCA TAGGGTGGTC GGTAGGTTTC CATCACCATG AGTCTCTTCA 60
ACCTGGACCG GTTCCGCTTT GAGAAGAGAA ATAAAATTCA GGAACAGCCC GAGCCAGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51140--CUE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0000792--C:heterochromatin
GO:0043596--C:nuclear replication fork
GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0051304--P:chromosome separation
GO:0000729--P:DNA double-strand break processing
GO:0070932--P:histone H3 deacetylation
GO:0070933--P:histone H4 deacetylation
GO:0000018--P:regulation of DNA recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000567	Aegilops tauschii	37.84	1.00e-100	361.00
IUUC-Aml-002063	Ailuropoda melanoleuca	80.08	0.00e+00	1610.00
IUUC-Atr-003078	Amborella trichopoda	35.98	4.00e-102	365.00
IUUC-Apl-003860	Anas platyrhynchos	72.62	0.00e+00	1393.00
IUUC-Aca-004485	Anolis carolinensis	69.49	0.00e+00	1387.00
IUUC-Aly-006561	Arabidopsis lyrata	39.23	2.00e-103	370.00
IUUC-Ath-006832	Arabidopsis thaliana	39.60	1.00e-104	374.00
IUUC-Ago-007758	Ashbya gossypii	44.74	3.00e-131	462.00
IUUC-Acl-008226	Aspergillus clavatus	44.36	5.00e-132	465.00
IUUC-Afl-008556	Aspergillus flavus	45.21	5.00e-129	455.00
IUUC-Afu-008799	Aspergillus fumigatus	43.78	1.00e-131	464.00
IUUC-Ani-009127	Aspergillus nidulans	45.20	4.00e-129	455.00
IUUC-Ang-009676	Aspergillus niger	43.94	1.00e-130	461.00
IUUC-Aor-010184	Aspergillus oryzae	44.82	8.00e-130	457.00
IUUC-Ate-010559	Aspergillus terreus	43.87	4.00e-129	456.00
IUUC-Ame-011933	Astyanax mexicanus	59.98	0.00e+00	896.00
IUUC-Bta-012963	Bos taurus	79.48	0.00e+00	1608.00
IUUC-Bci-013670	Botrytis cinerea	41.63	1.00e-116	414.00
IUUC-Bdi-014286	Brachypodium distachyon	38.03	3.00e-102	366.00
IUUC-Bol-016519	Brassica oleracea	39.67	4.00e-104	372.00
IUUC-Bra-017239	Brassica rapa	39.67	2.00e-103	370.00
IUUC-Cel-018253	Caenorhabditis elegans	44.87	8.00e-142	498.00
IUUC-Cja-019465	Callithrix jacchus	79.48	0.00e+00	1599.00
IUUC-Cfa-020637	Canis familiaris	79.67	0.00e+00	1629.00
IUUC-Cpo-021822	Cavia porcellus	81.49	0.00e+00	1524.00
IUUC-Csa-023315	Chlorocebus sabaeus	86.33	0.00e+00	1462.00
IUUC-Cin-025444	Ciona intestinalis	50.08	6.00e-174	603.00
IUUC-Cgl-026383	Colletotrichum gloeosporioides	34.67	9.00e-105	374.00
IUUC-Cne-027090	Cryptococcus neoformans	36.51	3.00e-113	402.00
IUUC-Dre-028385	Danio rerio	59.15	0.00e+00	883.00
IUUC-Dno-028932	Dasypus novemcinctus	79.87	0.00e+00	1623.00
IUUC-Dse-031394	Dothistroma septosporum	43.02	9.00e-104	371.00
IUUC-Dme-031640	Drosophila melanogaster	45.69	5.00e-155	541.00
IUUC-Eca-033276	Equus caballus	80.58	0.00e+00	1634.00
IUUC-Fca-035936	Felis catus	79.73	0.00e+00	1605.00
IUUC-Fal-037636	Ficedula albicollis	67.33	0.00e+00	1346.00
IUUC-Fso-038229	Fusarium solani	34.43	4.00e-111	395.00
IUUC-Gmo-039654	Gadus morhua	57.31	0.00e+00	867.00
IUUC-Ggr-039922	Gaeumannomyces graminis	33.24	2.00e-92	333.00
IUUC-Gga-040646	Gallus gallus	66.60	0.00e+00	1373.00
IUUC-Gac-042320	Gasterosteus aculeatus	67.13	0.00e+00	807.00
IUUC-Gma-042832	Glycine max	39.42	7.00e-105	374.00
IUUC-Ggo-044875	Gorilla gorilla	73.26	0.00e+00	1479.00
IUUC-Hsa-046992	Homo sapiens	79.81	0.00e+00	1614.00
IUUC-Hvu-047408	Hordeum vulgare	38.14	2.00e-102	366.00
IUUC-Itr-047881	Ictidomys tridecemlineatus	91.11	0.00e+00	1030.00
IUUC-Kpa-049212	Komagataella pastoris	42.83	1.00e-124	440.00
IUUC-Lpe-050987	Leersia perrieri	36.01	5.00e-101	362.00
IUUC-Loc-052272	Lepisosteus oculatus	53.29	0.00e+00	995.00
IUUC-Lma-053118	Leptosphaeria maculans	43.31	1.00e-122	434.00
IUUC-Laf-053436	Loxodonta africana	77.75	0.00e+00	1570.00
IUUC-Mcc-055209	Macaca mulatta	86.27	0.00e+00	1479.00
IUUC-Mor-056994	Magnaporthe oryzae	34.35	2.00e-92	333.00
IUUC-Mpo-057305	Magnaporthe poae	35.99	1.00e-96	348.00
IUUC-Mtr-058432	Medicago truncatula	39.05	8.00e-102	364.00
IUUC-Mla-058972	Melampsora laricipopulina	43.01	8.00e-126	444.00
IUUC-Mga-059572	Meleagris gallopavo	63.65	0.00e+00	1200.00
IUUC-Mvi-060209	Microbotryum violaceum	39.94	6.00e-139	488.00
IUUC-Mmr-061416	Microcebus murinus	85.57	0.00e+00	1040.00
IUUC-Mdo-062869	Monodelphis domestica	93.36	0.00e+00	1868.00
IUUC-Mmu-064272	Mus musculus	76.97	0.00e+00	1467.00
IUUC-Mac-064963	Musa acuminata	34.28	2.00e-95	343.00
IUUC-Mpu-065755	Mustela putorius furo	80.46	0.00e+00	1628.00
IUUC-Mlu-067604	Myotis lucifugus	78.17	0.00e+00	1600.00
IUUC-Nfi-068310	Neosartorya fischeri	43.60	4.00e-131	462.00
IUUC-Ncr-068841	Neurospora crassa	33.28	3.00e-107	383.00
IUUC-Nle-069227	Nomascus leucogenys	79.81	0.00e+00	1615.00
IUUC-Opr-071088	Ochotona princeps	78.56	0.00e+00	1220.00
IUUC-Ont-072291	Oreochromis niloticus	67.39	0.00e+00	830.00
IUUC-Oan-073460	Ornithorhynchus anatinus	87.08	0.00e+00	1432.00
IUUC-Ocu-074811	Oryctolagus cuniculus	79.58	0.00e+00	1578.00
IUUC-Oba-075463	Oryza barthii	36.92	5.00e-99	355.00
IUUC-Obr-076342	Oryza brachyantha	37.10	4.00e-102	365.00
IUUC-Ogu-078837	Oryza glumaepatula	36.92	2.00e-99	356.00
IUUC-Oin-079623	Oryza indica	37.52	2.00e-99	357.00
IUUC-Ome-081105	Oryza meridionalis	35.29	4.00e-100	359.00
IUUC-Oni-082598	Oryza nivara	36.92	1.00e-99	357.00
IUUC-Opu-084040	Oryza punctata	36.92	6.00e-100	358.00
IUUC-Oru-084219	Oryza rufipogon	37.05	1.00e-99	357.00
IUUC-Osa-085461	Oryza sativa	36.92	7.00e-100	358.00
IUUC-Ola-087307	Oryzias latipes	66.93	0.00e+00	795.00
IUUC-Olu-087812	Ostreococcus lucimarinus	39.71	9.00e-102	363.00
IUUC-Oga-089064	Otolemur garnettii	78.73	0.00e+00	1591.00
IUUC-Oar-090054	Ovis aries	79.69	0.00e+00	1603.00
IUUC-Ptr-091228	Pan troglodytes	79.96	0.00e+00	1619.00
IUUC-Pan-092769	Papio anubis	78.74	0.00e+00	1497.00
IUUC-Psi-093202	Pelodiscus sinensis	72.90	0.00e+00	1418.00
IUUC-Pma-094725	Petromyzon marinus	45.80	0.00e+00	864.00
IUUC-Pno-095130	Phaeosphaeria nodorum	41.75	3.00e-108	386.00
IUUC-Ppa-095559	Physcomitrella patens	40.18	3.00e-105	376.00
IUUC-Pfo-096546	Poecilia formosa	66.93	0.00e+00	838.00
IUUC-Pab-097698	Pongo abelii	79.62	0.00e+00	1605.00
IUUC-Pop-099986	Populus trichocarpa	39.67	5.00e-105	375.00
IUUC-Ppe-101649	Prunus persica	39.23	4.00e-103	369.00
IUUC-Pva-102138	Pteropus vampyrus	78.94	0.00e+00	1571.00
IUUC-Pgr-103272	Puccinia graminis	36.34	9.00e-124	437.00
IUUC-Ptt-103880	Puccinia triticina	37.04	8.00e-130	458.00
IUUC-Pte-104260	Pyrenophora teres	43.02	6.00e-117	415.00
IUUC-Pyt-104532	Pyrenophora triticirepentis	37.43	9.00e-89	322.00
IUUC-Rno-105903	Rattus norvegicus	77.67	0.00e+00	1486.00
IUUC-Sce-106399	Saccharomyces cerevisiae	44.65	6.00e-124	438.00
IUUC-Sja-107887	Schizosaccharomyces japonicus	40.92	5.00e-144	505.00
IUUC-Spo-108154	Schizosaccharomyces pombe	41.07	6.00e-145	508.00
IUUC-Smo-108759	Selaginella moellendorffii	40.45	2.00e-103	369.00
IUUC-Sit-110023	Setaria italica	37.04	2.00e-100	360.00
IUUC-Sly-111423	Solanum lycopersicum	39.46	6.00e-105	374.00
IUUC-Sbi-114688	Sorghum bicolor	36.86	2.00e-100	360.00
IUUC-Sre-114983	Sporisorium reilianum	37.16	7.00e-115	408.00
IUUC-Ssc-116030	Sus scrofa	79.81	0.00e+00	1605.00
IUUC-Tgu-117451	Taeniopygia guttata	78.30	0.00e+00	1222.00
IUUC-Tru-118600	Takifugu rubripes	66.46	0.00e+00	790.00
IUUC-Tsy-119130	Tarsius syrichta	71.97	0.00e+00	1322.00
IUUC-Tni-119758	Tetraodon nigroviridis	57.53	0.00e+00	860.00
IUUC-Tca-121797	Theobroma cacao	40.26	1.00e-104	374.00
IUUC-Tre-121883	Trichoderma reesei	40.00	3.00e-102	366.00
IUUC-Tvi-122333	Trichoderma virens	39.63	1.00e-110	394.00
IUUC-Tae-122848	Triticum aestivum	37.84	1.00e-100	361.00
IUUC-Tur-126594	Triticum urartu	37.84	2.00e-100	360.00
IUUC-Tme-127106	Tuber melanosporum	42.34	8.00e-121	428.00
IUUC-Tbe-127911	Tupaia belangeri	89.88	0.00e+00	922.00
IUUC-Ttr-128597	Tursiops truncatus	81.28	0.00e+00	1582.00
IUUC-Uma-129321	Ustilago maydis	36.55	8.00e-113	401.00
IUUC-Vpa-130686	Vicugna pacos	72.60	0.00e+00	1398.00
IUUC-Vvi-131046	Vitis vinifera	39.11	7.00e-103	367.00
IUUC-Xtr-132740	Xenopus tropicalis	65.93	0.00e+00	1123.00
IUUC-Xma-134260	Xiphophorus maculatus	66.61	0.00e+00	828.00
IUUC-Yli-134634	Yarrowia lipolytica	40.85	1.00e-137	484.00
IUUC-Zma-135493	Zea mays	36.68	2.00e-100	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence