iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-09	35.4	456	484

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrt 32
           +++ +f  d  + ++++ D+++kvW +++
   Q: 456  IFSNQFqVDnLRCATAGEDNVVKVWCITD 484
           5555567443779************8776 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MNFDDEDRLE LQFLAGGNIV EHAPVFSPDG RFMFVRCLTK VQVYATSTGE LTRVLDDATA 60
PLISLELDLK QPDLLIGCTS TGELVRWNWR AGVLKKTVSL TLGPGDTILT CHLMDLYKGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTGCGCGG GCACACTGAG CTACACGTGC ATTGATGTGA TTGAATTTTG ATGGTAGAAT 60
AACCCACGAA AAGTGGTTAA AAAAGAGTTA GTTTAGATAA ACTCCTGCAT ACAGACAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005938--C:cell cortex
GO:0005813--C:centrosome
GO:0000776--C:kinetochore
GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008017--F:microtubule binding
GO:0009267--P:cellular response to starvation

KEGG

dme:Dmel_CG12050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001159	Aegilops tauschii	25.30	1.00e-18	87.80
IUUC-Aml-001772	Ailuropoda melanoleuca	29.80	3.00e-65	242.00
IUUC-Atr-003057	Amborella trichopoda	25.26	3.00e-26	112.00
IUUC-Apl-004225	Anas platyrhynchos	36.65	6.00e-52	197.00
IUUC-Aca-004528	Anolis carolinensis	29.83	2.00e-58	219.00
IUUC-Aly-006353	Arabidopsis lyrata	23.58	2.00e-28	120.00
IUUC-Ath-006605	Arabidopsis thaliana	24.73	4.00e-31	129.00
IUUC-Afu-009094	Aspergillus fumigatus	23.92	2.00e-12	66.60
IUUC-Ani-009273	Aspergillus nidulans	23.87	1.00e-25	111.00
IUUC-Ate-010477	Aspergillus terreus	23.10	2.00e-16	80.90
IUUC-Ame-011596	Astyanax mexicanus	29.97	2.00e-58	220.00
IUUC-Bta-013087	Bos taurus	29.17	2.00e-65	243.00
IUUC-Bdi-014281	Brachypodium distachyon	23.83	1.00e-28	120.00
IUUC-Bol-015950	Brassica oleracea	23.92	2.00e-24	107.00
IUUC-Bra-016891	Brassica rapa	26.01	5.00e-23	102.00
IUUC-Cja-019291	Callithrix jacchus	29.80	1.00e-61	230.00
IUUC-Cfa-020826	Canis familiaris	31.07	3.00e-65	242.00
IUUC-Cpo-022075	Cavia porcellus	30.62	2.00e-70	259.00
IUUC-Csa-023922	Chlorocebus sabaeus	30.33	1.00e-66	247.00
IUUC-Cho-025070	Choloepus hoffmanni	29.88	1.00e-63	237.00
IUUC-Cin-025661	Ciona intestinalis	28.33	5.00e-41	161.00
IUUC-Cgl-026473	Colletotrichum gloeosporioides	24.66	6.00e-20	92.00
IUUC-Cne-026862	Cryptococcus neoformans	23.30	1.00e-28	121.00
IUUC-Cme-027187	Cyanidioschyzon merolae	28.97	6.00e-07	49.30
IUUC-Dre-028194	Danio rerio	27.64	4.00e-53	202.00
IUUC-Dno-029393	Dasypus novemcinctus	28.52	1.00e-55	211.00
IUUC-Dor-030476	Dipodomys ordii	27.01	2.00e-38	153.00
IUUC-Dse-031561	Dothistroma septosporum	31.58	2.00e-10	61.20
IUUC-Ete-033185	Echinops telfairi	29.78	9.00e-64	237.00
IUUC-Eca-034192	Equus caballus	31.12	6.00e-66	244.00
IUUC-Eeu-034737	Erinaceus europaeus	35.71	1.00e-32	133.00
IUUC-Fca-036473	Felis catus	29.93	1.00e-66	247.00
IUUC-Fal-037083	Ficedula albicollis	32.12	7.00e-56	211.00
IUUC-Fox-037801	Fusarium oxysporum	21.88	2.00e-18	87.00
IUUC-Fso-038117	Fusarium solani	24.94	3.00e-17	83.20
IUUC-Gmo-038612	Gadus morhua	30.26	2.00e-56	213.00
IUUC-Gga-040173	Gallus gallus	28.98	2.00e-33	135.00
IUUC-Gac-042628	Gasterosteus aculeatus	30.32	5.00e-55	208.00
IUUC-Gma-043929	Glycine max	23.04	6.00e-19	89.00
IUUC-Ggo-044723	Gorilla gorilla	30.15	7.00e-65	241.00
IUUC-Hsa-045976	Homo sapiens	30.33	1.00e-66	247.00
IUUC-Itr-048873	Ictidomys tridecemlineatus	30.74	3.00e-67	249.00
IUUC-Lch-049534	Latimeria chalumnae	29.77	1.00e-60	227.00
IUUC-Lpe-050961	Leersia perrieri	23.83	7.00e-27	115.00
IUUC-Loc-052545	Lepisosteus oculatus	30.14	3.00e-60	226.00
IUUC-Laf-053408	Loxodonta africana	30.36	8.00e-66	244.00
IUUC-Mcc-055400	Macaca mulatta	30.51	1.00e-65	243.00
IUUC-Meu-056448	Macropus eugenii	36.19	3.00e-40	159.00
IUUC-Mor-057047	Magnaporthe oryzae	24.34	9.00e-10	58.50
IUUC-Mpo-057552	Magnaporthe poae	21.48	4.00e-09	56.60
IUUC-Mtr-058588	Medicago truncatula	24.59	4.00e-22	99.40
IUUC-Mla-059102	Melampsora laricipopulina	24.61	2.00e-16	80.50
IUUC-Mga-059364	Meleagris gallopavo	35.75	3.00e-53	202.00
IUUC-Mvi-060387	Microbotryum violaceum	26.18	8.00e-26	112.00
IUUC-Mmr-061240	Microcebus murinus	29.78	4.00e-64	238.00
IUUC-Mdo-062461	Monodelphis domestica	28.78	3.00e-62	232.00
IUUC-Mmu-063820	Mus musculus	30.70	7.00e-65	241.00
IUUC-Mac-064657	Musa acuminata	22.64	5.00e-23	102.00
IUUC-Mpu-066642	Mustela putorius furo	30.00	1.00e-62	234.00
IUUC-Mlu-067113	Myotis lucifugus	30.19	4.00e-56	212.00
IUUC-Ncr-068881	Neurospora crassa	22.12	2.00e-18	87.00
IUUC-Nle-069700	Nomascus leucogenys	30.51	2.00e-67	249.00
IUUC-Opr-070788	Ochotona princeps	35.61	2.00e-57	216.00
IUUC-Ont-071934	Oreochromis niloticus	28.23	3.00e-52	199.00
IUUC-Oan-073397	Ornithorhynchus anatinus	25.45	2.00e-15	75.10
IUUC-Ocu-074934	Oryctolagus cuniculus	30.30	8.00e-65	241.00
IUUC-Oba-075556	Oryza barthii	24.94	1.00e-25	110.00
IUUC-Obr-076321	Oryza brachyantha	24.78	2.00e-29	124.00
IUUC-Ogl-077721	Oryza glaberrima	24.43	1.00e-30	127.00
IUUC-Ogu-078969	Oryza glumaepatula	23.29	1.00e-29	124.00
IUUC-Oin-079774	Oryza indica	24.43	3.00e-30	126.00
IUUC-Olo-080797	Oryza longistaminata	22.11	3.00e-11	63.20
IUUC-Ome-081288	Oryza meridionalis	24.17	1.00e-29	124.00
IUUC-Oni-082679	Oryza nivara	24.43	1.00e-30	127.00
IUUC-Opu-083382	Oryza punctata	22.82	6.00e-29	122.00
IUUC-Oru-085008	Oryza rufipogon	24.78	2.00e-31	130.00
IUUC-Osa-086286	Oryza sativa	24.78	2.00e-31	130.00
IUUC-Ola-087159	Oryzias latipes	34.09	5.00e-52	198.00
IUUC-Olu-087737	Ostreococcus lucimarinus	25.10	2.00e-26	113.00
IUUC-Oga-087932	Otolemur garnettii	30.11	1.00e-64	240.00
IUUC-Oar-090087	Ovis aries	29.21	3.00e-66	246.00
IUUC-Ptr-090836	Pan troglodytes	30.33	2.00e-66	246.00
IUUC-Pan-091703	Papio anubis	29.78	9.00e-63	234.00
IUUC-Psi-093289	Pelodiscus sinensis	29.44	4.00e-58	218.00
IUUC-Pma-094549	Petromyzon marinus	31.88	1.00e-17	84.70
IUUC-Ppa-095363	Physcomitrella patens	23.80	1.00e-22	101.00
IUUC-Pfo-096805	Poecilia formosa	29.18	5.00e-54	205.00
IUUC-Pab-098646	Pongo abelii	30.51	4.00e-67	248.00
IUUC-Pop-099099	Populus trichocarpa	22.30	3.00e-22	99.40
IUUC-Pca-100866	Procavia capensis	34.93	4.00e-60	225.00
IUUC-Ppe-101421	Prunus persica	22.63	2.00e-20	93.20
IUUC-Pva-103237	Pteropus vampyrus	34.67	3.00e-25	109.00
IUUC-Pgr-103514	Puccinia graminis	25.85	2.00e-07	50.40
IUUC-Pte-104266	Pyrenophora teres	21.19	2.00e-12	67.80
IUUC-Pyt-104657	Pyrenophora triticirepentis	21.70	6.00e-18	85.90
IUUC-Rno-105785	Rattus norvegicus	30.02	1.00e-62	234.00
IUUC-Sha-107623	Sarcophilus harrisii	28.75	1.00e-61	230.00
IUUC-Sja-107756	Schizosaccharomyces japonicus	30.34	6.00e-11	62.00
IUUC-Spo-108237	Schizosaccharomyces pombe	24.06	9.00e-16	78.20
IUUC-Smo-109506	Selaginella moellendorffii	24.88	9.00e-26	111.00
IUUC-Sit-110013	Setaria italica	24.22	5.00e-27	115.00
IUUC-Sly-111872	Solanum lycopersicum	24.18	3.00e-22	100.00
IUUC-Sbi-114792	Sorghum bicolor	24.26	2.00e-28	120.00
IUUC-Sre-114923	Sporisorium reilianum	24.88	6.00e-31	129.00
IUUC-Ssc-115517	Sus scrofa	29.60	5.00e-67	248.00
IUUC-Tgu-116868	Taeniopygia guttata	30.04	3.00e-53	202.00
IUUC-Tru-118503	Takifugu rubripes	29.51	1.00e-51	197.00
IUUC-Tsy-119349	Tarsius syrichta	30.43	3.00e-64	239.00
IUUC-Tni-120437	Tetraodon nigroviridis	33.72	9.00e-46	177.00
IUUC-Tca-121127	Theobroma cacao	26.04	1.00e-24	107.00
IUUC-Tvi-122323	Trichoderma virens	22.89	9.00e-13	68.60
IUUC-Tae-123418	Triticum aestivum	24.75	1.00e-29	124.00
IUUC-Tme-127167	Tuber melanosporum	22.59	4.00e-11	63.20
IUUC-Tbe-127376	Tupaia belangeri	38.27	7.00e-37	147.00
IUUC-Ttr-128949	Tursiops truncatus	31.11	2.00e-61	229.00
IUUC-Uma-129522	Ustilago maydis	23.97	4.00e-34	139.00
IUUC-Vda-129794	Verticillium dahliae	24.74	9.00e-13	68.60
IUUC-Vpa-130282	Vicugna pacos	34.93	5.00e-61	228.00
IUUC-Xtr-132078	Xenopus tropicalis	29.39	9.00e-53	201.00
IUUC-Xma-133958	Xiphophorus maculatus	29.75	8.00e-55	207.00
IUUC-Zma-135807	Zea mays	23.39	1.00e-25	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence