iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099880

Ensembl Protein ID

POPTR_0014s12510.1

UniProt Accession

B9I9S6; B9I9S6_POPTR

Genbank Protein ID

EEE98663.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_824186; POPTR_0014s12510g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s12510	POPTR_0014s12510.1	POPTR_0014s12510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-16	60.2	69	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgv 34
           gH+d ++ +af   s+ +ll s+s Dgti+ WD+r + 
   Q: 69   GHSDTINQIAFsvsSSpHLLHSCSSDGTIRAWDTRNFQ 106
           8************8556889*************98765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEGTTEMEIE EPKSKKFGLK NSIQTNFGND YVFQIVPKDD WSSVAVSLST KAVKLYSPVT 60
GQFQGECKGH SDTINQIAFS VSSSPHLLHS CSSDGTIRAW DTRNFQQVSC IDSGSSQEIF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTTTCTTT CTGGTTTCCA AAATAAGCAG ACCGACACAG AGCACAGCGA AGATGGAAGG 60
AACGACAGAG ATGGAGATTG AGGAACCGAA ATCAAAGAAA TTCGGGCTAA AAAACTCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0014s12510g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013979	Botrytis cinerea	27.57	6.00e-12	64.30
IUUC-Cre-022931	Chlamydomonas reinhardtii	31.37	1.00e-14	77.00
IUUC-Dme-031947	Drosophila melanogaster	21.37	3.00e-11	62.40
IUUC-Ncr-068709	Neurospora crassa	23.51	7.00e-11	60.80
IUUC-Sce-106334	Saccharomyces cerevisiae	27.74	6.00e-13	67.80
IUUC-Tru-117689	Takifugu rubripes	31.19	4.00e-31	128.00
IUUC-Tni-120137	Tetraodon nigroviridis	32.52	1.00e-29	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence