iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	26.18	1.00e-23	105.00	IUUC-Sce-106260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MDSESLACSS VEKDLTRVVS KLEQLHENAE ADIGDIATQM SELVEVLSRA EQLVTTLNSS 60
TQVSQDDPMG DAVSMQVETE PTAPQRLTER QVESVRNALA RCHERVQKLS TEHRDLHGSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATTATTC GATTTATCGA TAGCATCGTG AGTGGTCCAC CCAGCTCCAA TGTTTTCGTC 60
TTCTTTGTGT TATAAAATTA ACAATTTATA AATACGCATT TTCCGCTGGA CCACCGAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR013144--CRA_dom
IPR024964--CTLH/CRA
IPR006595--CTLH_C
IPR006594--LisH
IPR027711--Rmd5
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50897--CTLH
PS50896--LISH

Pfam

PF10607--CLTH

SMART

SM00757--CRA
SM00668--CTLH

Gene Ontology

GO:0005737--C:cytoplasm
GO:0034657--C:GID complex
GO:0005634--C:nucleus
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG3295

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000501	Aegilops tauschii	35.40	2.00e-55	209.00
IUUC-Aml-001548	Ailuropoda melanoleuca	47.29	2.00e-88	318.00
IUUC-Atr-003004	Amborella trichopoda	30.50	5.00e-53	201.00
IUUC-Apl-003644	Anas platyrhynchos	46.99	2.00e-88	318.00
IUUC-Aca-005137	Anolis carolinensis	40.71	6.00e-77	280.00
IUUC-Aly-005615	Arabidopsis lyrata	33.33	1.00e-48	186.00
IUUC-Ath-007247	Arabidopsis thaliana	32.42	1.00e-50	192.00
IUUC-Ago-007826	Ashbya gossypii	41.67	1.00e-15	76.60
IUUC-Acl-008282	Aspergillus clavatus	34.10	2.00e-55	208.00
IUUC-Afl-008705	Aspergillus flavus	33.81	3.00e-56	211.00
IUUC-Afu-009079	Aspergillus fumigatus	32.66	5.00e-51	194.00
IUUC-Ani-009387	Aspergillus nidulans	33.52	5.00e-52	197.00
IUUC-Ang-009525	Aspergillus niger	29.01	4.00e-31	128.00
IUUC-Aor-009954	Aspergillus oryzae	33.81	3.00e-56	211.00
IUUC-Ate-010352	Aspergillus terreus	33.43	1.00e-52	200.00
IUUC-Ame-011850	Astyanax mexicanus	48.63	3.00e-88	317.00
IUUC-Bgr-012198	Blumeria graminis	34.01	1.00e-47	182.00
IUUC-Bta-013363	Bos taurus	47.29	2.00e-88	318.00
IUUC-Bci-013985	Botrytis cinerea	31.94	2.00e-49	189.00
IUUC-Bdi-014918	Brachypodium distachyon	34.67	4.00e-56	211.00
IUUC-Bol-015549	Brassica oleracea	29.90	5.00e-48	184.00
IUUC-Bra-017752	Brassica rapa	29.65	2.00e-51	195.00
IUUC-Cel-018146	Caenorhabditis elegans	43.02	5.00e-15	74.70
IUUC-Cja-019683	Callithrix jacchus	47.29	1.00e-88	318.00
IUUC-Cfa-020186	Canis familiaris	47.29	2.00e-88	318.00
IUUC-Cpo-021863	Cavia porcellus	47.29	2.00e-88	318.00
IUUC-Cre-022621	Chlamydomonas reinhardtii	39.74	1.00e-26	111.00
IUUC-Csa-023778	Chlorocebus sabaeus	47.29	2.00e-88	318.00
IUUC-Cho-024394	Choloepus hoffmanni	38.25	7.00e-63	233.00
IUUC-Cin-025509	Ciona intestinalis	37.59	2.00e-75	275.00
IUUC-Csv-025906	Ciona savignyi	42.81	5.00e-76	277.00
IUUC-Cgl-026770	Colletotrichum gloeosporioides	28.98	3.00e-41	161.00
IUUC-Cne-026984	Cryptococcus neoformans	29.45	4.00e-30	124.00
IUUC-Cme-027169	Cyanidioschyzon merolae	30.18	1.00e-39	156.00
IUUC-Dre-027541	Danio rerio	48.33	2.00e-88	318.00
IUUC-Dno-028947	Dasypus novemcinctus	46.22	1.00e-82	298.00
IUUC-Dor-030778	Dipodomys ordii	36.13	1.00e-76	279.00
IUUC-Dse-031216	Dothistroma septosporum	31.45	1.00e-46	179.00
IUUC-Ete-033138	Echinops telfairi	37.94	3.00e-76	278.00
IUUC-Eca-034297	Equus caballus	47.29	2.00e-88	318.00
IUUC-Fca-035452	Felis catus	39.58	2.00e-83	301.00
IUUC-Fal-037162	Ficedula albicollis	46.99	1.00e-88	319.00
IUUC-Fox-037791	Fusarium oxysporum	29.60	5.00e-44	171.00
IUUC-Fso-038261	Fusarium solani	31.44	1.00e-47	182.00
IUUC-Gmo-038538	Gadus morhua	48.33	1.00e-87	315.00
IUUC-Ggr-039758	Gaeumannomyces graminis	29.48	6.00e-43	167.00
IUUC-Gga-040152	Gallus gallus	46.99	1.00e-88	319.00
IUUC-Gac-042375	Gasterosteus aculeatus	48.33	2.00e-87	315.00
IUUC-Gma-043473	Glycine max	30.22	4.00e-40	157.00
IUUC-Ggo-044610	Gorilla gorilla	40.28	7.00e-84	303.00
IUUC-Hsa-046828	Homo sapiens	47.29	2.00e-88	318.00
IUUC-Hvu-047623	Hordeum vulgare	34.78	1.00e-55	209.00
IUUC-Itr-048574	Ictidomys tridecemlineatus	47.29	2.00e-88	318.00
IUUC-Kpa-049125	Komagataella pastoris	28.61	1.00e-35	142.00
IUUC-Lch-049725	Latimeria chalumnae	40.00	3.00e-88	318.00
IUUC-Lpe-051452	Leersia perrieri	35.60	1.00e-56	212.00
IUUC-Loc-052201	Lepisosteus oculatus	46.02	1.00e-87	315.00
IUUC-Lma-053061	Leptosphaeria maculans	32.94	4.00e-57	214.00
IUUC-Laf-054447	Loxodonta africana	39.58	2.00e-84	305.00
IUUC-Mcc-055378	Macaca mulatta	47.29	2.00e-88	318.00
IUUC-Meu-056571	Macropus eugenii	37.99	4.00e-78	284.00
IUUC-Mor-056969	Magnaporthe oryzae	29.62	1.00e-41	162.00
IUUC-Mpo-057427	Magnaporthe poae	29.31	2.00e-44	172.00
IUUC-Mtr-058293	Medicago truncatula	29.10	1.00e-45	176.00
IUUC-Mla-059074	Melampsora laricipopulina	30.60	4.00e-41	161.00
IUUC-Mga-059978	Meleagris gallopavo	46.99	1.00e-88	319.00
IUUC-Mvi-060298	Microbotryum violaceum	27.38	2.00e-26	112.00
IUUC-Mmr-061460	Microcebus murinus	46.69	4.00e-85	307.00
IUUC-Mdo-061921	Monodelphis domestica	37.73	5.00e-76	278.00
IUUC-Mmu-063553	Mus musculus	47.29	2.00e-88	318.00
IUUC-Mac-064452	Musa acuminata	34.17	2.00e-47	182.00
IUUC-Mpu-066545	Mustela putorius furo	47.29	2.00e-88	318.00
IUUC-Mlu-067713	Myotis lucifugus	40.05	8.00e-84	303.00
IUUC-Nfi-068340	Neosartorya fischeri	31.40	3.00e-49	188.00
IUUC-Ncr-068889	Neurospora crassa	36.00	3.00e-42	165.00
IUUC-Nle-069876	Nomascus leucogenys	40.05	1.00e-83	302.00
IUUC-Opr-070502	Ochotona princeps	44.90	4.00e-56	210.00
IUUC-Ont-072436	Oreochromis niloticus	48.63	8.00e-88	316.00
IUUC-Oan-072730	Ornithorhynchus anatinus	46.99	3.00e-88	317.00
IUUC-Ocu-073997	Oryctolagus cuniculus	47.29	2.00e-88	318.00
IUUC-Oba-075935	Oryza barthii	35.71	3.00e-56	211.00
IUUC-Ogl-077599	Oryza glaberrima	36.02	7.00e-57	213.00
IUUC-Ogu-079031	Oryza glumaepatula	33.25	4.00e-57	214.00
IUUC-Oin-079236	Oryza indica	36.02	7.00e-57	213.00
IUUC-Olo-080825	Oryza longistaminata	36.02	7.00e-57	213.00
IUUC-Ome-081998	Oryza meridionalis	36.02	1.00e-56	213.00
IUUC-Oni-082555	Oryza nivara	36.02	7.00e-57	213.00
IUUC-Opu-084156	Oryza punctata	36.02	2.00e-56	212.00
IUUC-Oru-085269	Oryza rufipogon	36.02	7.00e-57	213.00
IUUC-Osa-085795	Oryza sativa	36.02	7.00e-57	213.00
IUUC-Ola-087481	Oryzias latipes	48.18	6.00e-86	310.00
IUUC-Oga-088917	Otolemur garnettii	47.29	2.00e-88	318.00
IUUC-Oar-090104	Ovis aries	47.29	2.00e-88	318.00
IUUC-Ptr-090545	Pan troglodytes	40.28	7.00e-84	303.00
IUUC-Pan-091970	Papio anubis	47.29	2.00e-88	318.00
IUUC-Psi-093133	Pelodiscus sinensis	47.29	6.00e-89	319.00
IUUC-Pma-094313	Petromyzon marinus	41.09	2.00e-82	298.00
IUUC-Pno-094966	Phaeosphaeria nodorum	33.25	1.00e-53	203.00
IUUC-Ppa-095263	Physcomitrella patens	35.48	7.00e-53	200.00
IUUC-Pfo-096415	Poecilia formosa	47.59	5.00e-85	306.00
IUUC-Pab-098226	Pongo abelii	47.29	2.00e-88	318.00
IUUC-Pop-099161	Populus trichocarpa	31.42	2.00e-47	182.00
IUUC-Pca-100101	Procavia capensis	38.37	2.00e-45	175.00
IUUC-Ppe-101172	Prunus persica	30.61	5.00e-46	177.00
IUUC-Pva-102124	Pteropus vampyrus	46.08	3.00e-73	267.00
IUUC-Pgr-103586	Puccinia graminis	37.44	2.00e-31	129.00
IUUC-Pte-104149	Pyrenophora teres	32.40	2.00e-52	198.00
IUUC-Pyt-104577	Pyrenophora triticirepentis	31.99	4.00e-46	177.00
IUUC-Rno-105160	Rattus norvegicus	47.29	2.00e-88	318.00
IUUC-Sce-106260	Saccharomyces cerevisiae	26.18	3.00e-24	105.00
IUUC-Sha-107085	Sarcophilus harrisii	39.34	2.00e-83	301.00
IUUC-Sja-107986	Schizosaccharomyces japonicus	27.67	7.00e-32	130.00
IUUC-Spo-108054	Schizosaccharomyces pombe	28.85	4.00e-41	161.00
IUUC-Ssl-108439	Sclerotinia sclerotiorum	33.55	2.00e-48	185.00
IUUC-Smo-109084	Selaginella moellendorffii	35.71	3.00e-56	211.00
IUUC-Sit-109808	Setaria italica	34.94	1.00e-56	212.00
IUUC-Sly-111578	Solanum lycopersicum	33.84	2.00e-50	191.00
IUUC-Stu-112255	Solanum tuberosum	33.84	2.00e-50	191.00
IUUC-Sar-113433	Sorex araneus	38.86	2.00e-64	238.00
IUUC-Sbi-114206	Sorghum bicolor	34.34	3.00e-56	211.00
IUUC-Sre-115108	Sporisorium reilianum	35.12	3.00e-29	122.00
IUUC-Ssc-115466	Sus scrofa	47.29	9.00e-89	319.00
IUUC-Tgu-116744	Taeniopygia guttata	46.99	1.00e-88	319.00
IUUC-Tru-118729	Takifugu rubripes	48.33	2.00e-87	315.00
IUUC-Tsy-119164	Tarsius syrichta	47.29	9.00e-89	319.00
IUUC-Tni-119975	Tetraodon nigroviridis	48.33	2.00e-87	315.00
IUUC-Tca-121086	Theobroma cacao	31.61	4.00e-47	181.00
IUUC-Tre-122252	Trichoderma reesei	30.38	1.00e-42	166.00
IUUC-Tvi-122591	Trichoderma virens	30.21	1.00e-43	169.00
IUUC-Tae-122825	Triticum aestivum	35.40	8.00e-56	210.00
IUUC-Tur-126299	Triticum urartu	35.71	2.00e-56	212.00
IUUC-Tme-127008	Tuber melanosporum	35.24	6.00e-54	203.00
IUUC-Tbe-128119	Tupaia belangeri	47.29	2.00e-88	318.00
IUUC-Ttr-128810	Tursiops truncatus	36.27	1.00e-77	282.00
IUUC-Uma-129656	Ustilago maydis	34.15	5.00e-28	118.00
IUUC-Vda-129967	Verticillium dahliae	31.40	4.00e-39	154.00
IUUC-Vvi-131145	Vitis vinifera	33.54	1.00e-51	196.00
IUUC-Xtr-132522	Xenopus tropicalis	40.05	1.00e-85	308.00
IUUC-Xma-134046	Xiphophorus maculatus	48.02	2.00e-86	311.00
IUUC-Yli-134400	Yarrowia lipolytica	33.63	2.00e-49	189.00
IUUC-Zma-134785	Zea mays	33.73	5.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence