iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gac-041560

Ensembl Protein ID

ENSGACP00000017136.1

UniProt Accession

G3PHR0; G3PHR0_GASAC

Protein Name

WD repeat-containing protein 35

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000012959.1	ENSGACT00000017170.1	ENSGACP00000017136.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-07	30.6	19	47

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf.sd.tllvsGsdDgtikvWDlrtgv 34
           c+++  d +++++G+dDg +kv  l t++
   Q: 19   CVSWnKDqGFIACGGDDGLLKVLKLETQT 47
           9***9778**************9998876 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

MFIYLSKKIA IPNNIHLKCV SWNKDQGFIA CGGDDGLLKV LKLETQTDDA KLKGLAAPSN 60
LSMNQTLEGH SGAVQVVTWN EQYEKLTTSD QNGLIIVWML YKGAWYEEMI NNRNKSVVRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCATCT ATCTCAGCAA GAAGGTGAGT CCGCTAGCTA TCAACACGTT AACACATATT 60
CCAGTGTTTG CTAACAACGT CACTGTCTGC TGTTTCACAG ATTGCTATTC CCAACAATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0970--Cilium biogenesis/degradation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR016024--ARM-type_fold
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR017233--WDR35

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036064--C:ciliary basal body
GO:0005737--C:cytoplasm
GO:0030991--C:intraciliary transport particle A
GO:0035721--P:intraciliary retrograde transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004049	Anas platyrhynchos	76.12	0.00e+00	1913.00
IUUC-Cin-025165	Ciona intestinalis	67.96	1.00e-131	462.00
IUUC-Dno-029699	Dasypus novemcinctus	84.08	0.00e+00	724.00
IUUC-Dme-032005	Drosophila melanogaster	46.90	0.00e+00	1051.00
IUUC-Gmo-038607	Gadus morhua	83.02	0.00e+00	2066.00
IUUC-Lch-050449	Latimeria chalumnae	80.76	0.00e+00	2003.00
IUUC-Mlu-068238	Myotis lucifugus	24.54	5.00e-08	54.30
IUUC-Ocu-074262	Oryctolagus cuniculus	21.05	8.00e-08	53.10
IUUC-Ptr-090752	Pan troglodytes	25.00	8.00e-08	53.50
IUUC-Psi-093525	Pelodiscus sinensis	78.87	0.00e+00	1966.00
IUUC-Pma-094159	Petromyzon marinus	73.49	0.00e+00	741.00
IUUC-Pab-098428	Pongo abelii	24.91	3.00e-08	54.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence