iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090752

Ensembl Protein ID

ENSPTRP00000026494.4

UniProt Accession

H2QNC4; H2QNC4_PANTR

Genbank Protein ID

ENSPTRP00000026494

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03028720

Gene Name

IFT122

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000015378.4	ENSPTRT00000028710.4	ENSPTRP00000026494.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-07	31.4	51	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGs 20
           gH+d v+c+a+  d ++++sGs
   Q: 51   GHKDTVYCVAYaKDgKRFASGS 72
           8***********777******9 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MRAVLTWRDK AEHCINDIAF KPDGTQLILA AGSRLLVYDT SDGTLLQPLK GHKDTVYCVA 60
YAKDGKRFAS GSGIPPQWRX XXXLRICHVS RSWSVMSSLH LHLTFLGLHK TVRVTATNKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCTTTTG CTGCTTTTCT GGCTTTCCCT TTCGGACATG CGCGCTCGGA GCAAGGCGCC 60
CTCGCACTCA GCTTACCGCG CATGTACGTT GCCAGGGGTA ACGCAGGTAG CCAAAGTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036064--C:ciliary basal body
GO:0097546--C:ciliary base
GO:0005929--C:cilium
GO:0005829--C:cytosol
GO:0030991--C:intraciliary transport particle A
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0032391--C:photoreceptor connecting cilium
GO:0048593--P:camera-type eye morphogenesis
GO:0060830--P:ciliary receptor clustering involved in smoothened signaling pathway
GO:0060271--P:cilium assembly
GO:0010172--P:embryonic body morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0035115--P:embryonic forelimb morphogenesis
GO:0060971--P:embryonic heart tube left/right pattern formation
GO:0072594--P:establishment of protein localization to organelle
GO:0035720--P:intraciliary anterograde transport
GO:0035721--P:intraciliary retrograde transport
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0021914--P:negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0061512--P:protein localization to cilium
GO:0007227--P:signal transduction downstream of smoothened
GO:0060831--P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	84.39	0.00e+00	2080.00
IUUC-Apl-003504	Anas platyrhynchos	85.51	0.00e+00	1752.00
IUUC-Aca-004767	Anolis carolinensis	78.47	0.00e+00	2019.00
IUUC-Ame-011642	Astyanax mexicanus	72.99	0.00e+00	1699.00
IUUC-Bta-012969	Bos taurus	82.51	0.00e+00	2026.00
IUUC-Cel-018670	Caenorhabditis elegans	36.94	0.00e+00	776.00
IUUC-Cja-019249	Callithrix jacchus	90.45	0.00e+00	2031.00
IUUC-Cfa-020915	Canis familiaris	85.01	0.00e+00	2052.00
IUUC-Cpo-021888	Cavia porcellus	88.00	0.00e+00	1798.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	45.54	0.00e+00	1047.00
IUUC-Csa-023533	Chlorocebus sabaeus	90.33	0.00e+00	2241.00
IUUC-Cin-025121	Ciona intestinalis	56.37	0.00e+00	1345.00
IUUC-Csv-026240	Ciona savignyi	56.58	0.00e+00	1291.00
IUUC-Dno-029685	Dasypus novemcinctus	78.10	0.00e+00	1915.00
IUUC-Dme-032005	Drosophila melanogaster	26.74	5.00e-09	57.40
IUUC-Ete-032682	Echinops telfairi	82.46	0.00e+00	1628.00
IUUC-Eca-033831	Equus caballus	84.83	0.00e+00	2130.00
IUUC-Eeu-034919	Erinaceus europaeus	82.84	0.00e+00	972.00
IUUC-Fca-036559	Felis catus	84.44	0.00e+00	2115.00
IUUC-Fal-037340	Ficedula albicollis	83.37	0.00e+00	1686.00
IUUC-Gmo-038607	Gadus morhua	18.97	3.00e-07	51.20
IUUC-Gga-040595	Gallus gallus	85.10	0.00e+00	1748.00
IUUC-Gac-041560	Gasterosteus aculeatus	24.54	8.00e-08	53.10
IUUC-Ggo-045356	Gorilla gorilla	97.76	0.00e+00	2484.00
IUUC-Hsa-046135	Homo sapiens	98.07	0.00e+00	2497.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	81.10	0.00e+00	1938.00
IUUC-Lch-050183	Latimeria chalumnae	79.77	0.00e+00	1130.00
IUUC-Loc-052049	Lepisosteus oculatus	78.04	0.00e+00	1812.00
IUUC-Laf-053728	Loxodonta africana	91.06	0.00e+00	2090.00
IUUC-Mcc-054971	Macaca mulatta	96.05	0.00e+00	2434.00
IUUC-Meu-056446	Macropus eugenii	84.87	0.00e+00	1927.00
IUUC-Mga-059296	Meleagris gallopavo	78.15	0.00e+00	2003.00
IUUC-Mmr-061232	Microcebus murinus	87.31	0.00e+00	2184.00
IUUC-Mdo-062115	Monodelphis domestica	82.65	0.00e+00	2070.00
IUUC-Mmu-063664	Mus musculus	90.61	0.00e+00	2113.00
IUUC-Mpu-066136	Mustela putorius furo	87.75	0.00e+00	1986.00
IUUC-Mlu-068238	Myotis lucifugus	90.18	0.00e+00	2101.00
IUUC-Nle-069003	Nomascus leucogenys	95.05	0.00e+00	2138.00
IUUC-Ont-072080	Oreochromis niloticus	74.22	0.00e+00	1748.00
IUUC-Oan-072891	Ornithorhynchus anatinus	80.42	0.00e+00	842.00
IUUC-Ocu-074262	Oryctolagus cuniculus	84.30	0.00e+00	2108.00
IUUC-Ola-086538	Oryzias latipes	69.21	0.00e+00	1768.00
IUUC-Oga-088722	Otolemur garnettii	88.15	0.00e+00	2166.00
IUUC-Oar-089249	Ovis aries	90.44	0.00e+00	1815.00
IUUC-Pan-092472	Papio anubis	90.49	0.00e+00	2244.00
IUUC-Psi-093335	Pelodiscus sinensis	86.00	0.00e+00	1771.00
IUUC-Pma-094520	Petromyzon marinus	67.13	0.00e+00	1575.00
IUUC-Ppa-095600	Physcomitrella patens	40.61	4.00e-23	100.00
IUUC-Pfo-096526	Poecilia formosa	71.87	0.00e+00	1640.00
IUUC-Pab-098428	Pongo abelii	98.12	0.00e+00	1231.00
IUUC-Pca-100233	Procavia capensis	68.89	0.00e+00	920.00
IUUC-Pva-103064	Pteropus vampyrus	78.79	0.00e+00	1903.00
IUUC-Rno-105764	Rattus norvegicus	90.87	0.00e+00	2083.00
IUUC-Sha-106649	Sarcophilus harrisii	88.99	0.00e+00	2049.00
IUUC-Smo-109287	Selaginella moellendorffii	37.94	0.00e+00	832.00
IUUC-Tgu-116870	Taeniopygia guttata	77.54	0.00e+00	1941.00
IUUC-Tru-118661	Takifugu rubripes	68.03	0.00e+00	1735.00
IUUC-Tsy-119640	Tarsius syrichta	92.54	3.00e-109	390.00
IUUC-Tni-120812	Tetraodon nigroviridis	65.82	0.00e+00	1644.00
IUUC-Ttr-128862	Tursiops truncatus	86.57	0.00e+00	2208.00
IUUC-Vpa-130049	Vicugna pacos	85.59	8.00e-151	528.00
IUUC-Xtr-131914	Xenopus tropicalis	76.78	0.00e+00	1792.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence