iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	miRNAMap
RAID2
Protein-protein Interaction
IID	Mentha
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus	dbPTM	Phospho.ELM
PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-18	66.2	227	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++   +l+s++dD+++k WD+r
   Q: 227  HGQLVRDLDFnPNkqYYLASCGDDCKVKFWDTR 259
           8999*******555899**************86 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHIIDFDD ENNIINKNVL 60
LHQAGEIWHI SASPADKGVL ATCYNKTTDS RVQACAAVWR MPKELESGSH ESPDDPASTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGAAGTGAG CCGTCAGGGA GCCGGTCTGG GTCTCGTAGT CCATTTTTCA GGCGGGGAAT 60
GAATGGGTTC TGAGCGATCC CTGGTGAGGG GGGACTCGAG CTCTGAGGCG TGAGTAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0007--Acetylation
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:1904811--P:positive regulation of dense core granule transport

KEGG

mmu:380752

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	35.66	2.00e-43	169.00
IUUC-Aml-002348	Ailuropoda melanoleuca	90.32	3.00e-123	434.00
IUUC-Atr-003028	Amborella trichopoda	32.69	6.00e-52	197.00
IUUC-Apl-004211	Anas platyrhynchos	80.48	9.00e-177	612.00
IUUC-Aca-004893	Anolis carolinensis	88.11	0.00e+00	659.00
IUUC-Aly-005975	Arabidopsis lyrata	32.79	4.00e-51	195.00
IUUC-Ath-006902	Arabidopsis thaliana	33.51	1.00e-52	199.00
IUUC-Ame-010619	Astyanax mexicanus	85.79	0.00e+00	655.00
IUUC-Bta-013035	Bos taurus	87.08	0.00e+00	676.00
IUUC-Bdi-014619	Brachypodium distachyon	34.31	6.00e-56	211.00
IUUC-Bol-016581	Brassica oleracea	32.61	2.00e-51	196.00
IUUC-Bra-017885	Brassica rapa	33.24	7.00e-53	201.00
IUUC-Cel-018344	Caenorhabditis elegans	34.21	2.00e-55	209.00
IUUC-Cja-018975	Callithrix jacchus	85.99	0.00e+00	678.00
IUUC-Cfa-020214	Canis familiaris	89.41	0.00e+00	655.00
IUUC-Cpo-021363	Cavia porcellus	90.96	0.00e+00	648.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	27.75	8.00e-39	154.00
IUUC-Csa-023240	Chlorocebus sabaeus	93.28	0.00e+00	663.00
IUUC-Cho-024713	Choloepus hoffmanni	85.02	5.00e-177	613.00
IUUC-Cin-025678	Ciona intestinalis	47.03	1.00e-104	373.00
IUUC-Csv-026022	Ciona savignyi	47.04	4.00e-102	364.00
IUUC-Dre-027817	Danio rerio	84.24	0.00e+00	679.00
IUUC-Dno-030097	Dasypus novemcinctus	92.76	0.00e+00	665.00
IUUC-Dme-031866	Drosophila melanogaster	38.11	2.00e-73	269.00
IUUC-Ete-032575	Echinops telfairi	79.03	4.00e-134	470.00
IUUC-Eca-034323	Equus caballus	90.48	1.00e-141	495.00
IUUC-Eeu-035217	Erinaceus europaeus	70.73	1.00e-139	489.00
IUUC-Fca-035709	Felis catus	89.97	3.00e-169	587.00
IUUC-Fal-036989	Ficedula albicollis	87.86	0.00e+00	646.00
IUUC-Gmo-038623	Gadus morhua	72.94	3.00e-158	551.00
IUUC-Gga-040157	Gallus gallus	88.11	0.00e+00	655.00
IUUC-Gac-041368	Gasterosteus aculeatus	61.62	5.00e-113	400.00
IUUC-Gma-044196	Glycine max	31.71	2.00e-50	192.00
IUUC-Ggo-044513	Gorilla gorilla	87.38	0.00e+00	648.00
IUUC-Hsa-046844	Homo sapiens	86.96	0.00e+00	648.00
IUUC-Hvu-047435	Hordeum vulgare	35.11	6.00e-57	214.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	94.06	2.00e-153	535.00
IUUC-Lch-049696	Latimeria chalumnae	87.08	0.00e+00	656.00
IUUC-Lpe-050988	Leersia perrieri	34.58	5.00e-43	167.00
IUUC-Loc-052440	Lepisosteus oculatus	86.08	0.00e+00	649.00
IUUC-Laf-054088	Loxodonta africana	91.71	0.00e+00	658.00
IUUC-Mcc-055575	Macaca mulatta	86.17	1.00e-179	622.00
IUUC-Meu-056807	Macropus eugenii	65.94	6.00e-136	477.00
IUUC-Mtr-058599	Medicago truncatula	32.79	4.00e-52	198.00
IUUC-Mga-059336	Meleagris gallopavo	85.53	5.00e-177	613.00
IUUC-Mmr-061706	Microcebus murinus	92.51	0.00e+00	673.00
IUUC-Mdo-062736	Monodelphis domestica	88.63	0.00e+00	628.00
IUUC-Mac-065342	Musa acuminata	33.16	1.00e-50	193.00
IUUC-Mpu-066514	Mustela putorius furo	88.89	0.00e+00	684.00
IUUC-Mlu-067072	Myotis lucifugus	88.32	1.00e-104	371.00
IUUC-Nle-069307	Nomascus leucogenys	83.82	8.00e-177	612.00
IUUC-Opr-070283	Ochotona princeps	71.83	7.00e-143	500.00
IUUC-Ont-072532	Oreochromis niloticus	81.65	1.00e-176	612.00
IUUC-Oan-073222	Ornithorhynchus anatinus	87.25	2.00e-180	624.00
IUUC-Oba-075849	Oryza barthii	35.66	5.00e-44	172.00
IUUC-Obr-076488	Oryza brachyantha	32.75	7.00e-48	184.00
IUUC-Ogl-077928	Oryza glaberrima	35.93	1.00e-46	180.00
IUUC-Ogu-077997	Oryza glumaepatula	32.84	5.00e-44	171.00
IUUC-Oin-079848	Oryza indica	35.93	3.00e-46	179.00
IUUC-Oni-082492	Oryza nivara	35.66	4.00e-44	172.00
IUUC-Oru-085119	Oryza rufipogon	35.66	5.00e-44	171.00
IUUC-Osa-086152	Oryza sativa	35.93	1.00e-46	180.00
IUUC-Ola-086694	Oryzias latipes	73.27	5.00e-175	607.00
IUUC-Olu-087749	Ostreococcus lucimarinus	33.50	7.00e-24	103.00
IUUC-Oga-088180	Otolemur garnettii	90.67	9.00e-142	496.00
IUUC-Oar-089621	Ovis aries	69.92	2.00e-135	474.00
IUUC-Ptr-091053	Pan troglodytes	88.37	0.00e+00	641.00
IUUC-Pan-091918	Papio anubis	92.76	0.00e+00	659.00
IUUC-Psi-093545	Pelodiscus sinensis	88.60	0.00e+00	650.00
IUUC-Pma-094439	Petromyzon marinus	72.77	6.00e-165	573.00
IUUC-Pfo-096127	Poecilia formosa	83.98	0.00e+00	640.00
IUUC-Pab-097916	Pongo abelii	83.82	0.00e+00	635.00
IUUC-Pop-098864	Populus trichocarpa	32.17	1.00e-50	193.00
IUUC-Pca-100797	Procavia capensis	78.52	3.00e-118	418.00
IUUC-Ppe-101796	Prunus persica	33.88	6.00e-55	207.00
IUUC-Pva-103228	Pteropus vampyrus	81.16	0.00e+00	626.00
IUUC-Rno-104877	Rattus norvegicus	97.41	0.00e+00	716.00
IUUC-Sha-106940	Sarcophilus harrisii	88.66	0.00e+00	663.00
IUUC-Smo-109534	Selaginella moellendorffii	33.60	2.00e-58	219.00
IUUC-Sit-109958	Setaria italica	35.04	1.00e-55	210.00
IUUC-Sly-111871	Solanum lycopersicum	31.27	4.00e-50	191.00
IUUC-Stu-112128	Solanum tuberosum	30.98	1.00e-47	183.00
IUUC-Sar-113084	Sorex araneus	73.57	3.00e-110	391.00
IUUC-Sbi-114122	Sorghum bicolor	34.84	4.00e-55	208.00
IUUC-Ssc-115385	Sus scrofa	86.05	0.00e+00	634.00
IUUC-Tgu-117090	Taeniopygia guttata	85.79	3.00e-179	620.00
IUUC-Tru-118548	Takifugu rubripes	73.75	1.00e-175	608.00
IUUC-Tsy-119435	Tarsius syrichta	86.71	3.00e-180	624.00
IUUC-Tni-120311	Tetraodon nigroviridis	70.69	4.00e-150	524.00
IUUC-Tca-121141	Theobroma cacao	32.25	1.00e-48	187.00
IUUC-Tae-122717	Triticum aestivum	35.11	6.00e-57	214.00
IUUC-Tbe-127623	Tupaia belangeri	65.42	4.00e-111	394.00
IUUC-Ttr-128706	Tursiops truncatus	87.91	3.00e-126	445.00
IUUC-Vvi-130871	Vitis vinifera	32.71	8.00e-48	184.00
IUUC-Xtr-131950	Xenopus tropicalis	83.46	0.00e+00	640.00
IUUC-Xma-133364	Xiphophorus maculatus	83.46	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence